KEGG   Nicotiana tomentosiformis: 104103995
Entry
104103995         CDS       T05025                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nto03041]
    104103995
Spliceosome [BR:nto03041]
 Complex B
  Other components
   Complex B specific factors
    104103995
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C Ge1_WD40 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 WD40_RFWD3 DUF7165 Beta-prop_WDR19_1st Beta-prop_HPS5 VPS8_N Mala_s_1-like Beta-prop_IP5PC_F Beta-prop_LRRK2 Beta-prop_NOL10_N Beta-prop_IFT122_2nd zf_topless
Other DBs
NCBI-GeneID: 104103995
NCBI-ProteinID: XP_009610273
LinkDB
Position
3:8826511..8838126
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQSFQVLQNECQVSLNTVDSLETFVADINSGRWDA
VLPQVAQLKLPRHILEDLYEQIVLEMIELREMDTARAILRQTNVMGVIKQEQPERYLRLE
HLLVRTYFDPHEAYADSTKEKRRAQIAQALSQEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEDMYPTTLGHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSIVFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTS
DGSRVITASSDGSVKVWDSKTTECLHTFRPPPPLRGGDASVNSVHLFPKNTDHIIVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFLAACLSPKGEWIYSVGEDRNLYCFGFQSGKLEHL
MKVHEKEVIGITHHPHINLVATYGEDCTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcttctacccttgaaatcgaagctcgagatgtgattaagatagttcttcaattttgc
aaggagaattcattgcatcaaagttttcaggttttacaaaatgagtgccaagtttcactg
aatacagtggacagtcttgaaacatttgttgctgatattaatagtggaagatgggatgca
gtgttacctcaagttgcacaacttaagcttcctagacatatacttgaggatttgtatgag
cagatagttttggaaatgattgaacttcgggagatggatactgcacgggctattttaaga
caaacaaacgtgatgggtgtcattaaacaggagcaaccagaaagatatctgaggcttgaa
catctgctagtccggacttactttgatccacatgaggcttatgcagattcaaccaaagaa
aagaggcgtgcacaaattgcacaagcactctctcaagaggtttctgttgttccaccttca
cgactaatggctttgatcggtcaggccctgaagtggcagcagcatcaaggtctacttcca
cctggtactcaatttgacttattccgaggaacagctgccatgaaacaagatgaagaagat
atgtatccaacaactcttgggcacactattaagttcgggaagaaaagtcacccagagtgt
gctaggttctcaccagacggacaattcctcgtctcatgttcagttgatggatttattgag
gtttgggaccacataagtggaaaactgaagaaggatctccagtaccaggctgatgaaacc
tttatgatgcatgatgatgctgtcctttgtgttgatttcagcagagactcggaaatgctt
gcatctgggtctcaagatggaaaaataaaggtttggcgcataaggacgggtcagtgcttg
cgccgtcttgaacgtgcacactctcagggtgtcaccagtatagtcttctctcgagatgga
actcagatcttaagcacatcatttgacagcacagcaagaattcacggtctgaagtcagga
aagttgttaaaagaatttcgcggccactcgtcttacgttaatgacgctatctttactagt
gatggatctcgagtcattaccgcatctagtgatggctcagtgaaggtctgggattcgaaa
acaactgagtgtctacacacatttaggccaccacctccattaaggggcggtgatgcatct
gtgaactctgtccatcttttccctaagaatactgaccacattattgtgtgtaacaagaca
tcatctatttatctcatgacacttcaaggacaggttgttaaaagtttctcatctggtaaa
agagaaggtggagattttctcgctgcttgtctatcaccaaaaggtgaatggatttactct
gtaggcgaagacagaaatttgtactgctttggttttcaatcaggcaaactggagcatctg
atgaaggtacatgaaaaggaagttattggtattacacaccatccccatataaaccttgtt
gccacatatggagaagactgcaccatgaaactgtggaagccttaa

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