Nicotiana tomentosiformis: 104104038
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Entry
104104038 CDS
T05025
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104104038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104104038
Enzymes [BR:
nto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104104038
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
104104038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
104104038
NCBI-ProteinID:
XP_009610317
LinkDB
All DBs
Position
11:complement(114236384..114275866)
Genome browser
AA seq
1390 aa
AA seq
DB search
MRRTQEIIQFTKQPYIEDVGPRKIKSIQFSLFSEAEILKLGEVEVYRGVYYESTKKPIPN
GLLDPRMGPPNKNGGCETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCS
SILLDDKECRVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKTVTCSKCGYMNGMVK
KGQLKIIHERGNRFLDEFNAAISHKIELKTSVSVPPEIDPKAVYSLFKNMSDEDCELLYL
SDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANARLLEDISDTSFQ
NKSLSAWVDLQMEVAQYINSDVRGVPLHLQASKPMSGFTQRLKGKQGRFRGNLSGKRVEY
TGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIKH
PDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR
TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQD
FLTSSFLITRKDTFYERASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGVLLRP
YSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVL
LRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGEILVKQKLEEIHQNYKKCEDR
IQQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALHWRNSPLIMSQCGSKG
SPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLSATEF
FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASTSIIQFMYGDDGM
DPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIVNERLSYHDMSPEGGCSE
AFRASLSDFLIKHLAETLKRLREALLLDGEQYAGGDREYLENIALNISGITKKQLQVFLN
MCISRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA
AKKINTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIAITLDMET
IQVSQLCIDAYTVKQSILQTPKIKLKEQQVKVLNHRKLEVFPQANKDKLHFELHRLKNKL
PVVVVKGITTVQRAVVNKEQERDRKSDVKGETYELLVEGTGLLAVMGIDGVDGRNTKSNH
IMEVQQRLGIEAARISIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQK
MKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVQQVE
LNYQSEPMLS
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaacacaagagataatccaattcactaaacagccctacattgaagatgttggt
cctagaaaaataaaaagcattcaattttctctattctcagaggcggaaattttgaagtta
ggagaagttgaagtctaccgtggggtttactatgaatctactaaaaagcctattcctaat
ggcttgttagatccccgcatggggcctccaaacaagaatgggggttgtgaaacatgtcac
gggaactttagagagtgtccaggtcattacggatacttggtgcttactctacccgtttat
aatgttggatatttagggacggtggtggacctcttgaagtgcatatgcaagtgctgctcc
tcaatacttctagatgacaaggagtgtcgagtctttttgaagaagatgagaaacccaaga
actgagcctttgatgaagagtgaactacagaaaaaggttgtgaaaaagtgtacttccatg
acaagtggccagaagactgtcacatgttccaaatgcggatacatgaatggtatggtgaaa
aagggccagttaaaaatcatccatgaacgaggaaatcgtttcttggatgagtttaatgcg
gctatctctcacaagatagagctcaagacatctgttagtgtacctccagaaattgatcca
aaagcagtttactccctttttaagaatatgtctgatgaggattgtgagctactctacctc
agcgatagaccagaaaaacttcttgtcacaagtattccagtgccaccaatagctattcgc
ccttcagtatttgtggatggtggaacacagagcaatgagaatgacatcacggagaggctt
aagcgtattattcaagcaaatgccagacttctcgaagacatttctgataccagttttcaa
aataagagtctgagtgcttgggttgatctgcaaatggaagttgcacagtatataaacagt
gatgttcgtggagtgccactacatttgcaagctagtaaaccaatgagtggtttcactcaa
cgccttaaaggaaagcagggacgattccgtggaaatctctcagggaagcgtgtggaatat
actggccgaactgttatatctcctgatccaaatttgaaaattacagaggttgccattcca
atactgatggctcgaattttgacatatcctgagcgagtttcacagcacaacatagagaag
ttgaggcaatgtgttcgtaatggaccaaataaatatcctggtgcaaagtttattaagcat
cctgatggaactgagatatcgttgatgttctcttctagaaagcgtcatgctgatgaattg
aaatttggttatattgtcgatcgacatctggaagatggagatatagtcctgtttaacaga
cagccaagtctacataggatgtcaatcatgtctcatcgggcaaggataatgccatggcgc
acattgagatttaatgaatctgtatgcaatccttataatgctgattttgatggggatgag
atgaatatgcatgtgccacaaacagaagaggcgagaacagaggctcttatgttaatgggg
gttcaaaacaatttatgcactccgaagagtggcgaaattttggttgcttctacccaggat
tttttgacgtcttcctttctcatcacgaggaaggacacattctatgagcgtgcttccttt
tcacttatatgctcatatatgggcgacggaatggatcctatagatttaccaactccagca
ctgattaagccggttgagctttggaccgggaaacaactctttggtgtgctgctgcgtcca
tattcaaagatgagagtctatgtaaatctaacagtcacagaaaagagttacagcgggaaa
ggggaaacaatgtgcccaagtgatggatttgtttatttccgtaatagtgaactgatcagc
gggcaactcgggaaggctacattaggaaatggaaataaggatggtctatactctgttctg
ttgagggactacaagtcacatgctgctgcaacatgcatgaatcggcttgcaaaattaagt
gctcggtggattggtaatcatggattttctatagggattgatgatgtcacacctggggaa
atcttagttaagcaaaaactagaagagattcatcaaaattacaagaaatgtgaagaccgt
atccaacaatttaatgaaggaaagcttgccgtgcaaccaggctgtgatgctgcccagact
ctggaggctgaagtaactatgtcgttgaataaagttcgtgacgacataggaaaaatctgt
atgaaagcactacattggaggaatagtcctctgatcatgtcacagtgtggttcaaaagga
tccccaattaacataagccagatgattgcatgtgttggtcagcagtccgttggcggtcgt
cgtgctcctgatggattcatagatcgcagtcttcctcattttcctaccaaatcaaagttt
ccagctgctaaagggtttgtagctcattccttttttgacggtttgtcagcaactgagttc
ttttttcacacaatgggaggaagagaaggccttgttgatacggcagttaaaactgctgac
accggatacatgtctcgtcgacttatgaaagctttagaggaccttgctgtttattatgac
aacactgtacgaaatgccagcacaagtataattcagttcatgtatggtgatgatggcatg
gatccttcacagatggaagagaaaaaaggccgtcctctgaactttagcagattatttatg
aaagttaaggcaacgtgtcctcctagaggtgagaagagtttgtcttactcggaaatctgc
gagattgtcaatgaaaggctctcatatcatgatatgagtcctgaaggggggtgctcagag
gcattccgggcttcattatcagattttctgattaaacatttagctgaaaccttgaagaga
ttacgggaagccctcttattggatggagagcagtatgcagggggtgaccgtgaatatctt
gaaaacattgcattaaacatatctggtattacaaagaagcaactacaggtgttcctcaac
atgtgcatctctcgctatcacctgaaaagactagaatcgggaactgcaattggtgcaatt
ggagctcagagtattggggaacctgggacacagatgacattgaaaacctttcactttgct
ggagttgcaagcatgaacgttacacttggagttcctcgaataaaagaaattataaatgca
gcaaaaaagatcaatactcctattattactgcaaaacttctgtctgctgctaatttaact
gcagcaaggatgataaaagcccgcattgagaaaactcttttgggacaggtggctaagagt
gtaaagattgtgatggcgtctcgattagcatcaattgctattacgctagatatggagaca
attcaggtgtcacaactgtgtattgatgcttatactgtcaagcaatcgattttgcagacc
ccaaaaataaaattgaaagaacagcaagtaaaagttttgaaccacaggaagctggaagtt
tttcctcaggctaataaagataagctgcattttgaacttcaccggttgaaaaataagctt
cctgttgttgttgtgaagggtattactacggttcaaagggctgtggtgaacaaagaacaa
gaaagagaccgtaagagtgatgtcaaaggagaaacatatgagttgcttgttgaaggtacc
ggtctcctagccgtaatgggcattgacggagttgatggacgtaatacaaagagtaatcat
ataatggaggtgcaacaaagactaggcattgaagcagcaaggatctccataattgatgag
attaactataccatgtcaagtcatggaatgacaatagacttgcggcacatgatgcttcta
gcagatctgatgacatataagggtgaagttctgggaattaccagacatggcgttcagaaa
atgaaagatagcgtactgatgttagcctcatttgagaagacaaccgaccacctgtttaat
gcatctgtaaatggaagggatgataagatagaaggagttagcgaatgcatcatcatgggc
ataccaatgcagataggcactgggatgtttaaacttcggcaatgtgttcagcaggttgag
ctgaattatcaatcagaacctatgttatcctag
DBGET
integrated database retrieval system
