Nicotiana tomentosiformis: 104104179
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Entry
104104179 CDS
T05025
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104104179
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104104179
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104104179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
RING_XB3-XBAT31
Prok-RING_4
zf-RING_4
zf-Nse
Prok-RING_1
SLX1_C
Motif
Other DBs
NCBI-GeneID:
104104179
NCBI-ProteinID:
XP_009610478
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Position
5:50254994..50256922
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AA seq
443 aa
AA seq
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MQMYSLAAASWILMNQSSMLLFLAVLSFGLFSVKAEVPPSEDVVSSFQPSLAVVIGVLSI
MFSLTFLLLLYAKFCHRASSSVHNSTNIMHIQDGLVRSVLSGIDKTVVESLPFFRFSFIR
GSKQGLECAVCLSKFEDIEILRLLPKCKHAFHIDCIDKWLENHSTCPLCRHKVSAQDLSL
LTSSESLRFLSELRGESNLELYIQREESNLELYIQREESNLELYIQREENGSSRFSIGSS
FKKSEKGNKEEELPIQENNIDNQQQTDYQNQKALHRLNHRIIVSDVVFKNRWSNVTSSDL
IFLNSEMLNSNRFSSMDRITEQSTAKRVIEEEGQRMNIKDEMERKRLFESKFSKFQQNDL
SQFPEASESRTNSSKSLSQNEKRCMSEIIVHPRFNSNNIGNRKLSERRRKLWVPIARRTV
KWFANRERKSSSHTANRRQTLNL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgtattctctggctgcagcatcttggattctcatgaatcaatcaagtatgcta
ttattcttagcagtcctttcatttggattatttagtgttaaagctgaagtccctccatca
gaagatgtagttagcagtttccagccaagtcttgctgtggttattggtgtcctctccatc
atgttttcactaacttttcttcttctcctctatgccaagttctgtcatagggcatcttct
tctgttcataacagcaccaatattatgcatattcaagatggacttgttcgatcagtactg
tcaggtatcgataaaactgtggtggaatcactcccttttttcaggttctcttttatcaga
gggtccaaacaagggcttgaatgtgctgtttgcttatcaaaatttgaagatattgaaatc
cttagattgctgccaaagtgcaaacatgcctttcatattgactgtattgataagtggctg
gaaaaccattcaacctgtccactttgcaggcataaggtcagtgctcaagacctttcatta
cttacttcttcagagagtttgaggttcttgtctgagctaagaggggaatcaaatttggaa
ctatatatacaaagagaggaatcaaatttggaactatatattcaaagagaggaatcaaat
ttggaactatatattcaaagagaggagaatggatcctcaagatttagtattggaagcagc
tttaagaaatccgaaaagggtaacaaggaagaagaattgccaatacaagaaaacaatatt
gataatcaacaacaaacagattatcagaatcagaaagcactacacaggctcaatcatagg
attatagtctcagatgttgtcttcaagaatcgatggagtaatgtgacttcttcagacctt
atattcttgaattcagaaatgctcaatagcaacagattctcatcaatggacagaatcact
gagcaatccacggcgaaaagagtgatagaagaagaaggtcaaagaatgaatatcaaggat
gaaatggaaaggaaaagattgtttgagagcaagtttagcaaattccagcaaaatgattta
tctcaatttccagaagcctcagaatcaagaaccaattcatcaaaatcactaagtcaaaat
gagaaaagatgcatgtcagaaattatagtgcatccaagattcaacagcaacaacattggt
aatagaaagctttcggaacggagaaggaagctttgggttccaattgcaaggagaacagtc
aagtggtttgctaatagggaaagaaagtcctcctcacatacagcaaacagaagacaaaca
ctaaatttatag
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