Nicotiana tomentosiformis: 104104428
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Entry
104104428 CDS
T05025
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104104428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104104428
03029 Mitochondrial biogenesis [BR:
nto03029
]
104104428
Membrane trafficking [BR:
nto04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104104428
Atg1 complex
104104428
Mitochondrial biogenesis [BR:
nto03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104104428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
104104428
NCBI-ProteinID:
XP_009610808
LinkDB
All DBs
Position
3:95916297..95921207
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AA seq
608 aa
AA seq
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MDFQNNPQGEYGRFEQILAQFLLKTLHIVLDCRVPSIRPYGRSGEVKKSDKWFNLVLGDR
PAVLESLNFWHRNLMEPMIIDIILVQEKPSSLSEHSSGTAFAGAYTETIIERWVVQYEYL
RTMVPQVGESSYKKTYKKSIILLRSLYSMMRLLPAFKAFRKLSSTQSCDFDIIYKVSSFS
APFSRAEEELMKHYTFTPVDAQQGRFSISVSYRENLSDFNLEIAASFPPEIIADYVGSPL
TDPMRSFPSSSSDKDVRPTSFPSRGAQSSSSSPFQRPHSWTSGFLMSPSLPRTQPYVGSP
PLYRTPHELSSSPGDVYGQRVSPNNRLPIHHKATSFDEYQLSPPFSSSPSPSPPTYMSGA
NPGQTRMRSGTGPVSIPHPMMGTSSRYLSPNLSDPNRHSLPPMSPRSTKQDSSSNDSPSG
IRSFRKMDPLRTLESIISTMSPGQKISRDARDDSGRFSGLLSSSGSPRIFSRSSSRLSFQ
DDLDVFDFSCPFIVDDVDTSDSQVSENLDGRKGSEVSSQASATTRKSQDAAVGALVHMLR
TAPPLRQDSSCYTSHSVKTEVEGELGTASGFFINRKASDALEELKTYKDLKDLLLSKSAT
RSVSEGGT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaataatccacagggtgaatatggaaggtttgaacagatacttgctcaa
tttcttcttaaaaccttgcatattgttttggactgtagagttccttcgatccgaccttat
ggtcgtagtggagaggtgaaaaagagtgacaagtggttcaatttggtgttgggagatcgc
cctgctgttcttgaaagtttaaatttttggcacagaaatttgatggaaccaatgataata
gacataatacttgttcaagagaaacctagttctttgtcagagcatagttcaggtacagca
ttcgcaggggcgtatacagaaaccatcatagagaggtgggttgtacaatatgagtatctg
aggacaatggttcctcaagttggtgaatcttcttacaagaaaacatacaagaaatcaatt
atactgctccgctccctatattcaatgatgaggctccttcctgcattcaaggccttcagg
aaactttcatcaactcagagttgtgactttgatatcatttacaaggtctcttcatttagt
gctccattctccagggcagaggaggagttgatgaagcattatacttttactccagttgat
gcccagcagggccgtttttctatatctgtgtcatatcgtgaaaatctgtcagactttaac
ctggagattgcagcatcctttccgcctgagatcatcgcagattatgtaggcagtcctctt
actgacccaatgagatcatttccttcttcttcatctgataaggatgtccgccctacatca
tttccgtcgagaggggcacagtcatcttcttcatcacctttccagcggccgcacagttgg
acaagtggtttcctcatgtcaccttctttacctcggacccagccatatgtaggatctcca
cctttgtaccgcacaccacatgagctttcatcttcgcctggtgatgtatatgggcagagg
gtttcaccgaacaacagattgcctatacaccacaaagcgacgagctttgatgagtaccag
ctttcacctccattttcatcatctccatccccatctccacccacatatatgtcaggagca
aatcctgggcagactcgaatgcgttcaggaactggccctgtcagtatccctcatccaatg
atgggtacaagttccagatacctatctcctaatttgtctgatcctaacaggcattctctc
cctccaatgtctcccagaagcacaaagcaggattcatcatccaatgattccccttctgga
atcaggtcattccggaaaatggatccactaaggactctagagtctattatcagcactatg
agtcctggacaaaagatttctagagatgctagagatgattcagggcggttctcgggcttg
ctatcttcaagtggttcgccacgtatattttctagaagttctagcagactgtcttttcaa
gatgacttggatgtctttgatttttcctgtccttttattgttgatgatgtcgatacttcc
gattcgcaagtcagtgagaaccttgatgggagaaaaggttcagaagtctcttctcaagca
tctgcaacaaccagaaaatcccaagatgccgctgtaggtgcccttgttcacatgctgaga
actgctcctcctttgcgccaagattctagctgctatacctcacatagcgtaaagactgaa
gtggagggagaacttggtactgcatctggatttttcatcaatagaaaggcatcagatgct
cttgaggagctcaaaacttacaaagatttgaaagatctactactgtccaagagtgcaacc
cgttcagtcagtgagggtggaacttaa
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