Nicotiana tomentosiformis: 104104737
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Entry
104104737 CDS
T05025
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104104737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104104737
03029 Mitochondrial biogenesis [BR:
nto03029
]
104104737
Membrane trafficking [BR:
nto04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
104104737
Mitochondrial biogenesis [BR:
nto03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104104737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
104104737
NCBI-ProteinID:
XP_009611183
LinkDB
All DBs
Position
11:complement(5816133..5823007)
Genome browser
AA seq
366 aa
AA seq
DB search
MANQPSSYPILSTSFNQDNSCFAIGTREGFKIFDCNTGRLLYERAAGAFIIVEMLFSSSL
LAIVGAGEQPSLSPRRLCMFNTMTGVALNDLNFLTSILAVRMNKKRLIVILQEKTFIYDI
NSLKILDTIDTVPNPKGLCAFSPSLDGSYLALPASTTKGSLLVYNVSDLRLHCEIDAHRA
PLSVLTLSSGGTHIATASEQGTMIRVHLVSDATKSYSFRRGTYTSNIFSLSFAPAAELPD
ILLATSSSGSVHIFSLGSLPNQRSSGLLASIIPIPHTVSDALDPAQHCILHRAVPAGVRS
NTVIRKIEKFDDTATPEHVSLRATISMITYGGYFLEYVYNVNHQNKSSWTLEREFNLLTA
EASSLS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaaccctcttcttatccaattctctctacttccttcaatcaagacaacagt
tgctttgcaattggaacaagggaaggcttcaaaatctttgactgtaatactggaagactc
ctttatgaaagagctgctggagcattcattatagtagaaatgttgtttagctcaagcctt
ctcgcaatagttggggctggtgaacagccatctttgtcgccgcgaagactatgtatgttt
aatacaatgactggagtagctcttaatgatttaaacttcttaacttctatccttgctgtt
cgcatgaataagaaaagattgattgtcatattgcaggagaagacatttatttatgatata
aacagtcttaagatattggacactattgatacggtgccgaatccaaaaggactttgtgca
ttttcacccagcttggacggttcatatttggctcttccagcaagtacaacgaaaggatct
ttgttagtctataatgtttccgacctccgtttacactgtgagatagatgctcatcgagcg
ccattgtctgtcttgacactttcatcaggcgggactcacattgcaacagcgtctgaacaa
gggaccatgatcagagttcatcttgtttcagatgcaactaagtcatatagcttcaggaga
gggacgtacacttcaaatatcttttctttgtcattcgcgccagcagcagaacttccggat
attcttcttgcaactagttcttctggttctgtccatattttctctttgggttcactccca
aatcaaaggtcttctggtcttttagcatcaataataccaatacctcatactgttagtgat
gccctggatcctgctcaacattgcatactgcatcgtgctgttccagctggagtgagaagt
aatacggtgatccgcaaaatagagaaatttgacgacacagcaacacctgaacatgtctca
cttagagccactatatcaatgatcacgtatggcggatacttcctggagtacgtctacaat
gtcaaccatcagaacaaatcttcgtggaccttggaacgagaattcaatcttttaacagca
gaagcgtcctcgttatcatga
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integrated database retrieval system
