Nicotiana tomentosiformis: 104104908
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Entry
104104908 CDS
T05025
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104104908
Enzymes [BR:
nto01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
104104908
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104104908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
TRM5-TYW2_MTfase
RsmF-B_ferredox
Methyltransf_31
FtsJ
CCSAP
Motif
Other DBs
NCBI-GeneID:
104104908
NCBI-ProteinID:
XP_009611396
LinkDB
All DBs
Position
6:complement(42689919..42696854)
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AA seq
641 aa
AA seq
DB search
MAGPKLGKKTGSKLGKAPTKKKQKKEPLPPKPLEKEDLFISDGEGTDGDFEEDDGGFGDE
EQQEMNSDSDMSSDLDDPFAADILASGDADDGSADSDVDSDSDADDTDPVRKSKAIDEER
ERVKEDAEAELQLNIKEEADEFRLPTTEELEEETHRPPDLSNLQRRIKEIVRVLSNFKTL
RQEGVTRKDYVDQLKRDLGSYYGYNDFLIEVLVEMFPPVELIELIEAFEKPRPISLRTNT
LKTRRRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPVGATPEYMAGHYMLQSASSFLP
VMALAPQENERVVDMAAAPGGKTTYVAALMKNSGIIYANEMKESRLKSLTANLHRMGVTN
TIVCNYDGRELPKVLGQNTADRILLDAPCSGTGVISKDESVKTSKNAADIQNCSQLQKEL
ILAAIDMVDANSKSGGYIVYSTCSIMVDENEAVIDYALKKRDVKLVPCGLDFGRPGFIRF
RQHRFHTSLDKTRRFYPHVHNMDGFFVAKLKKMSNSKSAAKSSVQSDETQDAETIESSDQ
QNAEGDDKHSEQKGIAKENGNNEEVAGDKKRKRDVQKHSDKKGVGQHGGVTKNGKAENQS
VATKRREKKKPPPREEIAKAREEKRKALREAKRKATMKNKA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcccaaactcggtaagaaaacgggttctaaattaggaaaagcccctaccaag
aagaagcaaaaaaaggaacctctgccgcctaagccacttgaaaaggaagatctttttatt
agtgacggtgaaggaacagatggggattttgaagaagatgatggaggttttggtgatgaa
gaacaacaggaaatgaactcagattctgacatgtcttctgacttggacgacccctttgct
gctgatatattagcaagtggtgatgctgatgatggttcagcagattcggatgtagattct
gattcagatgcagatgatactgatcctgtaaggaagtcaaaagctattgatgaagaaagg
gaaagagtaaaggaggacgccgaagcagaattgcagctcaatattaaggaagaagctgat
gagttcagactgccaacaactgaggagcttgaagaagaaacacatagacccccggatctc
tctaatctccaaaggaggataaaagagattgttcgagtgctttcaaattttaagacattg
aggcaagagggtgtgacacggaaggattatgttgatcaacttaaaagggacttgggttca
tattatggatacaatgattttctgattgaggtgttagtggagatgtttccccctgttgag
ctgattgaacttattgaagcatttgaaaagccccgcccgatttctctacggacaaacact
ttaaagactcgcagacgggatttagctggtgttcttctgaacagaggtgtcaatttggac
ccgttaagcaaatggtcaaaggttggactagttgtgtacgattctcaagtaccagttggt
gccactcctgagtatatggctggtcattacatgctccaaagtgcgagctcttttctgccc
gtaatggcccttgcccctcaggagaatgagcgtgttgttgatatggctgctgctcctgga
ggcaaaacaacttatgttgctgcactgatgaaaaatagtggtattatttatgcaaatgag
atgaaggagtcaaggcttaaatcgctcactgctaatttgcatcgtatgggggtaacaaac
accattgtgtgtaactatgatggaagagagctgcctaaagttttgggtcagaatactgct
gataggattttgctggatgctccctgcagtggcactggggtaatctcgaaggatgagtct
gttaaaacttccaaaaatgctgctgatatacaaaattgctcacagctgcagaaggaactg
atacttgcagcaattgacatggttgatgccaactcaaaatcaggtggatacatagtgtat
tctacctgctccattatggttgacgagaatgaagcagttatagactatgcacttaagaag
agagatgttaaacttgtgccatgtggacttgattttgggaggcctggatttattcgcttt
aggcagcaccgtttccacacatctttggacaagactaggcgattctatcctcatgttcac
aacatggatggattctttgtagccaagttgaaaaagatgagcaattccaagtctgctgca
aaatcgtcggttcaatctgacgaaacacaagatgctgaaaccattgagagcagtgaccag
cagaacgctgaaggggatgacaagcattcagagcaaaaggggattgcaaaagagaatggg
aataatgaagaagtggcgggtgataaaaagaggaagagggatgtccaaaagcattcagat
aagaaaggtgttggacaacacggtggtgtaactaaaaatgggaaggcagaaaaccaatcg
gtggcgacaaaaaggagggaaaagaagaaaccccctcctagagaggaaattgcaaaagct
agggaagagaagaggaaagctcttagggaagcaaaacgaaaagcaacaatgaagaacaaa
gcttga
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