Nicotiana tomentosiformis: 104105016
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Entry
104105016 CDS
T05025
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104105016
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104105016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_EML
PutA_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
104105016
NCBI-ProteinID:
XP_009611541
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Position
11:complement(103847382..103856131)
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AA seq
1077 aa
AA seq
DB search
MIAEKPSWIRHEGMQIFSIDIQPGGLRFATGGGDHKVRIWNMKSVGRDLEADESTPKLLA
TLRDHFGSVNCVRWAKHGRYVASGSDDQVILVHERKPGSGTTEFGSGEPPDVENWKVTMT
LRGHTADVVDLNWSPDDSTLASGSLDNTIHIWSMSNGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTEGHWAKSLGSTFFRRLGWSPCGHYITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMFRRNLANAQEVKNASLGWSNGSSKNGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFSQSVVDLSWSPDGYSLFACSLDGS
VATFHFDGNELGVRLSDAELEELKRSRYGDVRGRQANLAESPAQLLLEAVAAKQSSSKKL
TKDLTQVQATSKSSVDLVSVVKIPKPQSDNGKKTEGVSSDSLNKPAASTRMSSPVKQREY
RRPDGRKRIIPEAVGVPTQQENISGIPQSPAIEFRNKTVDQRKDENGMVLSDASVREGFV
RKTVGLSADQKERSGLTARASISESLIIEKIPPSVGKDGSITIEQMGIVKDPPHLGSGGT
LLIRVFDNKEGEGTGPICLEAQPREQAANDILGAGNSFVMKETEILCTRGSQTLWSDRIS
GKVTVLAGNANFWAVGCEDGCVQIYTKCGRRAMPTMMMGSAAVFVDCDESWKFLLVTRKG
SFYLWDLFNRKCLLQDSLASLLSSDPKANAGTIKVISAKLSASGFPLVVLATRHAYLFDM
SLMCWLRVADDCFPASNFSSSWSSGSLHGGELAALQVDVRKFLARRPGWSRVTDDGVQTR
AHLEAQLASALALKSPSEYRQCLLSYIRFLAREADESRLREVCESFLGPPTGMAEAASSD
SNKTAWDPCVLGLKKHRLLREDILPAMASNRKVQRLLNEFMDLLSEYDDMSPEQNNVGTT
TSTEMNLEQTNVATTTSFPATDKMDTDVPMTQRTVPQTPITNPTPSTSINDRGTPARPAV
QSSDHVEPCILLKETMDSDQQETDEAKSVPPPTDQMKLDAPASVESEPSPSPKEKVS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgagaaacccagttggattagacatgagggtatgcaaattttctctattgat
attcagcctggtggacttaggtttgccactggtggtggtgatcacaaggttaggatatgg
aacatgaaatctgtaggtagagacttggaagcagatgaatctacaccgaaacttcttgcc
acactacgcgatcattttgggtcagtgaactgtgttagatgggcaaaacatggtcgatat
gttgcttctggctctgatgatcaggtgattctagtccatgagaggaaacctggctcagga
accacagagtttggcagtggagagccccctgatgtagagaattggaaagttactatgact
ttgagaggacacactgcagatgtggtggatctaaattggtctccagacgactcgacgttg
gctagtggtagtctggacaacaccattcatatctggagtatgagcaatggtatatgcact
gctgttctgaggggtcactctagtcttgttaaaggcgtcacatgggatccgattggttca
tttatagctagtcaatcagatgataagactgtcatcatttggcgaacaagtgactggagc
cttgctcatagaactgaaggtcattgggcaaaatctcttgggtcaaccttctttaggcgg
cttggatggtcaccctgtggacactatataactactactcatggttttcaaaagcctagg
cattctgctcctgttctggagagaggggaatggtctgccacttttgacttcttaggacac
aatgctcctgttattgtggttaagtttaatcattctatgtttcggaggaatttggctaat
gcgcaggaagtgaaaaatgcatctcttggatggtcaaatggttcttcaaaaaatggagga
aaagagtcccaaccctacaatgttattgctataggaagtcaagatcgcactataactgtg
tggacaacagcaagtccacgtcctctttttgtcgctaaacatttcttttctcaaagtgtt
gtggatttatcatggagccctgatggatattcactctttgcatgttctttggatggaagt
gtagccactttccattttgatgggaatgaactaggtgttcggttatctgatgctgaatta
gaggagttgaagagaagccgctatggtgatgttagaggccgacaagcaaatttagccgaa
agtccagcgcaactattacttgaagcagtagctgcaaagcaaagttcaagcaaaaaacta
actaaggatcttacacaagttcaagcaacctcaaaatcttctgttgatttggtgagtgtg
gtgaagattcctaaaccgcaatctgataacgggaaaaagaccgaaggagttagcagtgat
agcttaaataaacccgcagcctctacccgcatgtcaagtcccgtgaagcaaagagagtac
agacggcccgatggtcgaaagaggataattccagaagcagttggtgtgcctacccagcag
gagaacatctccggaattcctcaatctcctgctattgaattccgtaataagacagtggat
cagaggaaagatgagaatggtatggtactgtccgatgcaagtgttagggaaggatttgta
aggaaaacagttggtctcagtgctgaccaaaaggagcgctcaggtctaactgccagagct
agcatcagtgagagcctcatcattgagaagattccgccttctgtaggcaaggatggaagc
atcaccatagaacagatgggaattgtcaaggatccgcctcatttgggttctggtggtact
cttttaatcagggtttttgataataaagaaggggagggcactggtccaatttgcttagag
gctcaacccagagaacaagctgctaatgatattttaggggcaggaaattcatttgtaatg
aaggaaactgagatactttgtacaagggggagtcaaaccctctggtctgaccggatttct
ggaaaagttactgttttggctggaaatgccaacttttgggctgtgggatgtgaagacgga
tgcgttcagatttatacaaagtgtggacgacgtgccatgccaaccatgatgatgggatct
gctgcagtgtttgttgattgtgatgaatcttggaagtttttgcttgtcacaaggaaaggg
tcattttatctatgggatctatttaatcggaagtgtctccttcaagactctttggcttcc
cttttatcttcagatccaaaggcgaatgcaggcacaatcaaagtgatatcagcaaaatta
tcagcgtctggttttcctcttgttgtcctggccacacggcatgcatacctctttgatatg
agcctcatgtgctggctgagggttgcagatgattgttttcctgcatcgaatttttcaagc
tcctggagttcgggctcattgcatggtggtgagctagcggcattgcaggtggatgttagg
aagttcctggctagaagacccggttggagcagagtcacagatgatggggtacaaacacgt
gctcatttggaggctcagttggcttctgctcttgctttgaagtctcctagtgaatatcgt
caatgccttttatcctacatccggtttttagcaagagaggcagatgagtcacgcttgaga
gaagtttgtgagagctttcttgggcctcccacagggatggctgaggctgcatcctctgat
tcaaataaaactgcttgggacccttgtgtacttggtttgaaaaaacacagactccttaga
gaagacatacttccagcaatggcatcgaataggaaagtacagcggctgctcaacgagttc
atggatctcctctcagaatatgacgacatgagtcctgaacaaaacaatgtcgggaccacc
acatcaactgaaatgaatcttgaacagaccaatgttgcaaccactacatcttttccggct
acagataagatggataccgatgtccctatgactcaaagaacagttccacagacaccaata
actaacccaacaccttccacgtctataaatgaccgagggactcctgctcgtcctgcagta
caatcaagtgatcatgttgagccttgtatacttttgaaagaaacaatggactcggatcaa
caagaaactgatgaagctaaatctgtaccaccgccaacagatcaaatgaaattggatgca
cctgcatcagttgaatcggaaccatctccttcaccaaaggagaaggtttcttga
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