Nicotiana tomentosiformis: 104105387
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Entry
104105387 CDS
T05025
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04142
Lysosome
nto04144
Endocytosis
nto05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104105387
04142 Lysosome
104105387
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104105387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104105387
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nto04147
]
104105387
Membrane trafficking [BR:
nto04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104105387
Exosome [BR:
nto04147
]
Exosomal proteins
Proteins found in most exosomes
104105387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
104105387
NCBI-ProteinID:
XP_009611972
LinkDB
All DBs
Position
5:76685550..76698506
Genome browser
AA seq
1700 aa
AA seq
DB search
MAAANAPITMKEALTLSSIGVNPQFITFTNVTMESDKYICVRETAPQNSVVIVDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKQKMKSHQMPEQVVFWKWI
TPKIIGIVTQTSVYHWPIEGDTEPVKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQSLEAHAASFASFRVPESDRDSILISFATRSLNAGQVVS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIFVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSVGGFYAVNRRGQVLLATVNETTIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTIAKFQSVPVQ
PGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEDLGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYDGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSHVVGKYCEKRDPTLAVVAYRRGNCDDELINVTNKNSLFKLQARY
VVERMDADLWEKVLNPENEFRRQLIDQVVSTALSESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAANVLLDNIRDINRAVEFAFRVEEDAVWSQVAKAQLREGLISDAIE
SFIRADDTTQFLDVIRAAEDADVYHDLVKYLLMVRQKSKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLASTLVKLNQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEHQHWKELTYLYI
QYDEFDNAATTVMNHSPDAWDHMQFKDIVVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESVDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKRAGRWKQSSALSKKDNLYKDAMETASQSGD
RELAEDLLVYFIEQGKKECFASCLFVCYDLISPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQNEAKAKENEEKDVMKQQNMYAQLLPLALPAPPGMGGGFAPPPPPP
MGGMGMPPMPPFGMPPMGPY
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctaatgctccgatcactatgaaagaggcccttacattgtcaagtataggg
gtgaacccgcagttcatcacattcacaaatgttaccatggaatcagacaagtatatatgt
gttcgagagacggcaccacaaaatagtgtggtgattgttgatatgaatatgccaatgcag
cctttgcgccgccctattactgctgactctgctcttatgaatcccaattccagaattttg
gctctaaaagctcaagtaccaggaactactcaagatcacttacaaatttttaatattgag
gcaaagcagaaaatgaagtcacatcagatgcccgagcaggttgttttctggaagtggatt
accccgaagattataggaattgtcacacaaacctcagtctatcattggccaattgaaggt
gatactgagcctgtaaagatgtttgatagaacagccaacctagccaataaccaaataatc
aattatcgttgtgatccttcagagaaatggttggttttgattggtattgccccaggttca
ccggagaggccccaactggtcaaaggaaatatgcaactattttcagttgatcagcaacgg
agtcaatccctcgaggcacacgctgcatcatttgcatcattcagagtacctgaaagtgat
agggattccatactcatttcttttgccacgagaagcttgaatgctggacaggttgtatca
aagttgcatgtcattgagctaggagcccagccagggaaaccctcatttacaaaaaaacag
gcggatcttttcttccctccagattttgctgatgatttcccagttgccatgcagatatct
cataagtatagtttaatttttgtcatcacaaagcttgggcttctttttgtctatgacctg
gaaacagctactgcagtttacagaaataggattagcccagaccctattttcctgacagct
gaagcttcgtcagttggtgggttttatgccgtcaacaggcgaggccaagtgttgctagcc
acagtaaatgaaacaactattataccttttatcagtggccaattgaacaatctggagctt
gctgtcaatcttgctaaaagaggaaaccttccaggtgctgagaatttggtcgtccagcgg
tttcaagagttgtttgctcaaaccaagtacaaagaggctgctgagcttgctgctgaatca
cctcagggcatactccggacgcctgatactattgccaaatttcagagtgttcctgttcaa
ccagggcaaacacctcctcttttgcagtactttgggacacttttgacaaaagggaagctc
aatgcttttgagtcattagaactgtcacgccttgttgtcaaccaaaataagaagaacctt
ttggagaactggttagctgaggataagttggagtgcagtgaggatcttggcgaccttgtg
aagactgttgataatgaccttgccttgaagatatacatcaaagcaagagcaactccaaaa
gttgtcgctgcttttgctgagcgcagggagtttgacaagattctgatatattccaaacag
gttggatatacacctgactatctgttcctcctgcaaacaattcttcgatctgatcctcag
ggagctgttaactttgcactcatgatgtcccaaatggagggaggttgtccagttgattat
aatacaatcactgacctttttctccagaggaacttgatccgcgaagcaacagcatttttg
ttggatgttctgaaacctaaccttccagaacatggttttttgcagactaaggtattggaa
atcaatcttgtgactttccccaatgtagcagatgctatattagcaaatggaatgttcagt
cactatgatcgacctcgaattgctcaactttgtgaaaaagctggtctttatgtgcgggct
ctgcagcactattctgagctccctgatatcaagcgtgtcattgtgaacacacatgcgatt
gagcctcaggctctggttgagttctttgggactctttcgcgtgaatgggctcttgagtgc
atgaaagacctcctagtgatcaatatcaaaggcaacctccaaataattgttcaggttgca
aaagagtattgtgagcagttgggtgttgatgcctgcataaagctttttgagcaattcaag
tcttatgatgggttgtacttcttcttgggatcatatttgagttccagtgaggatcctgat
attcacttcaaatatattgaggcagctgccaggaccggacaaatcaaggaggttgagcgc
gtcacaagagaatcaaacttctatgaccctgaaaagacgaagaacttcttgatggaagcc
aaacttcccgatgctcggcctcttattaatgtttgtgaccgctttggttttgttcctgat
ctcacacactacctctataccaacaatatgctacggtacattgaaggttatgtccaaaag
gtcaacccaggaaacgctcctttagttgtgggacagttattggatgatgagtgtcctgag
gattttattaaaggcttgatcctttccgttcgttctctgcttcctgttgagccacttgtg
gatgaatgtgaaaagaggaaccgcctccgactgcttactcagtttttggaacatcttgtg
agtgaaggaagccaagatgtgcatgtacacaatgctctgggtaagatcatcatagatagc
aacaataacccggagcacttcctgacgaccaatccatattatgattcacatgttgtgggt
aaatattgtgagaagcgcgatcctaccctagctgttgttgcatatcggagagggaactgt
gatgatgaacttatcaatgtaacaaacaagaactctttgttcaaactgcaagccaggtat
gtcgttgagaggatggatgctgacctttgggagaaggttcttaaccctgaaaacgagttc
agaaggcagcttattgatcaagttgtctccactgctctgtctgagagcaaaagcccagaa
caagtttctgctgctgttaaagctttcatgactgccgatcttccgcatgaactgattgag
cttcttgaaaagattgtgctccagaactctgcattcagtgggaactttaatctgcaaaac
ttgcttatcttgacagccattaaagctgatccttcaagagttatggactatatcaacagg
cttgataattttgatggacctgcagtaggggaggtagctgtagaagcccaactttatgaa
gaagcatttgcaatcttcaagaagttcaatttgaatgtccaggctgccaatgttctgcta
gataatatccgcgatataaatcgggctgtggagtttgccttccgagttgaagaagatgct
gtttggagccaagtggctaaagctcaactgagagaaggattaatcagtgatgctattgag
tcgtttattcgtgcagatgataccacccaatttttggatgtcattcgtgctgcagaggat
gcggatgtttaccatgatttggtgaagtatctgctgatggtaaggcagaagtcaaaagag
cctaaggttgacagtgaactaatctatgcatatgctaaaatagatcgattgagcgacatt
gaagagttcattctcatgccaaatgttgctaatctaccgaatgttggtgaccggttgtat
gatgaagccttatatgaggctgcaaagatcatatttgcttttatttctaactgggccaag
ttggctagtacacttgtgaagctaaatcagttccaaggtgctgttgatgcagcgcgtaaa
gcaaatagtgcaaaaacgtggaaagaagtctgctttgcttgtgttgacgctgaagagttc
cgcttagctcagatttgtgggcttaacattatcgtacaggtggatgatctggaggaagtg
agtgaatattaccaaaacagaggatgtttcaatgaattgatctcccttatggagagtggg
ctgggtttggagcgtgcccatatgggtattttcacagaacttggcgtcctttatgccaga
taccgttacgagaagctcatggaacacattaagttattttccacccgtctcaacattccc
aagcttatccgtgcctgtgatgagcatcaacactggaaagaacttacatatttgtatatc
caatatgatgaatttgacaatgctgccactactgtcatgaatcattctccggatgcttgg
gatcatatgcagttcaaagatattgttgtcaaagttgctaatgtggagctttattacaag
gccgtccatttctatttgcaagagcatcctgatcttatcaatgatcttttaaatgttctt
gcacttagggtggaccacacccgtgtagtcgacataatgagaaaggctggtcatcttcgc
ctagtgaagccttacatgattgctgttcaaagtaacaatgtttctgctgtcaacgaggcc
cttaatgagatttatgttgaagaagaagactatgatagattacgtgaatcagttgatttg
catgataactttgaccagattggccttgcgcagaagatagagaaacatgagcttcttgag
atgaggcgggttgctgcttatatctataaaagggctggtcgatggaagcaatccagtgct
ttgtcgaagaaagataatctttacaaagatgcaatggagactgcctcacaatccggggat
cgtgaacttgctgaagatttgcttgtttatttcattgaacaggggaagaaagaatgcttt
gcatcgtgcctgtttgtttgttatgatttgattagcccggatgttgcccttgagcttgcg
tggatgaataatatgatcgactttgcattcccgtacctgttacagtttattcgcgaatac
actggcaaggttgatgagctaataaaagataaaattgaggctcaaaatgaagcaaaagcc
aaagagaatgaagagaaggacgttatgaagcagcagaatatgtatgcacagctgctgccc
ctggctttgcctgctccaccgggtatgggaggaggctttgctccaccaccaccacctcca
atgggtggaatgggaatgcctcccatgcctccatttggtatgccacccatgggtccctac
taa
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