Nicotiana tomentosiformis: 104105398
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Entry
104105398 CDS
T05025
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104105398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104105398
03041 Spliceosome [BR:
nto03041
]
104105398
03032 DNA replication proteins [BR:
nto03032
]
104105398
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
104105398
Spliceosome [BR:
nto03041
]
Complex A
U1 snRNP components
Sm proteins
104105398
U2 snRNP components
104105398
Complex B
U1 snRNP components
104105398
U4/U6.U5 tri-snRNP components
104105398
Complex C
U2 snRNP components
104105398
DNA replication proteins [BR:
nto03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
104105398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104105398
NCBI-ProteinID:
XP_009611983
LinkDB
All DBs
Position
2:45356108..45362565
Genome browser
AA seq
133 aa
AA seq
DB search
MSRSLGIPVKLLHEATGHIVTVEMKSGEVYRGSMVECEDNWNCQLESITYTAKDGRVSQL
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGTSLGVGRGRAIAMRAKAQAAGGRG
AAPGRGVVPPVRR
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaagcttgggcataccggtaaagcttctacacgaagcgacggggcatatagtg
acggtagagatgaagagtggagaggtgtacagaggaagtatggtggagtgcgaggacaac
tggaattgccaactcgagagcatcacttacactgctaaagatggaagggtgtcacaacta
gagcacgtttttattagaggcagcaaagtcagattcatgataattcctgatatgcttaag
aatgctcccatgttcaagcggctagaagcaagaatcaagggcaaaggtacatcacttggt
gttggtcggggacgtgctattgctatgcgagctaaagctcaagctgctggtggtcgcgga
gcagcacctggtcgaggtgttgtgccacctgtaagaagataa
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integrated database retrieval system
