Nicotiana tomentosiformis: 104105514
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Entry
104105514 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104105514
Membrane trafficking [BR:
nto04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104105514
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
104105514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40
WD40_Prp19
Beta-prop_VPS8
WDR55
Synaptobrevin
TFIIIC_delta
Motif
Other DBs
NCBI-GeneID:
104105514
NCBI-ProteinID:
XP_009612131
LinkDB
All DBs
Position
3:complement(61465014..61487118)
Genome browser
AA seq
1081 aa
AA seq
DB search
MFAKIFEKLNPTPPHSASRGNEKLTDLEATIAVHYGIPSTASILAFDPIQQLLAIGTLDG
RIKVIGGSNVEGLLFSPKPLPFKNLEFLQNQGFLVGVSNGNEIQVWDLENRRMSSNLQWE
SNITAFSMIYDTHYMFVGDEYGYLSVLKYESREGSLELLPYHIPPNLIAEAAEISMPDQL
AIVGLLPQPSSLGNRVLIAYENGLIILWDVTEDRAVLVKKYKQLHVKDEIVVHASKNASE
EKFRGSSDNQEGEKEISSLCWLSSDGSILAVGYVDGDILLWNLSVPGKKSSEAEASSSYV
KLQLSAGDRRLPVIILRWSANNAQNGCGGQLFVYGGDAIGSEEALTVLNLDWSSGIAALK
CVERVDLGLDGSFADAIVVSNANGTGIDDASSLFVLTNPGQLHFYDKTSLSALKSNPKKK
HADFAVRCPTVVPTLEPRITVANLYPVDRKWNSSRTPSEEVMNAQLHPAHGVTEREIKMP
LSGSIAGQLPLTEDGGIERILVAGYLDGSVRLWNATFPVFSLIAILEAQVEGIQDTGPRT
AISALDFSSTALTLAIGHQCGQVRVSSLMGQSKTTSLNLVPDTEQDVQYCPGDAGFQFSL
VKSPVSILKFVAVGSRLVAGFESGQVAMLDISSSSALFVTDCLSSSSSGITSVAVKTLAD
AREDTVDHCEEGTTNAHPKEVISVLTRDAEVILLDGSTGNKISSQAKHTKEMSTAISLYI
LDDITSVSEELQKHSSTLDSAVQPEDLRQKCVDYQILLCCQNGLHLFSLSSIIQGGVNPI
REVKLAKPCSWTSILKNDAEKYGLVLVYQSGAVEIRSLPDLNVLGESSLMSILRWNSKIN
MDKTISSPGKGMISLVNGSEFAILSLLAFGNDFRIPEALPPLHNKSLAAAADDAVSTSQH
QKKKQNATVGSFGGIMKGLKGFKGQQAADYSNARDSLVTHLENIFSRFPFSDPTNVMDDL
GSLELKLDDIEIDEPVHVTSSSLSSDDVRKEKETDRDRLLEGGIGDAKPRQRTREEIIAK
YRNKGDAASAAAEAKDKLLERQEKLERLSKNTQELQSGAENFADLAGELVKAMEKRKWWN
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaaaatctttgaaaagctcaatcctacgccaccgcatagtgcatcccgagga
aatgagaaattgacagacctggaagcaacaattgctgttcactatgggattccatctaca
gcgtccattctggcatttgaccctatacaacaactcttggcgataggaacattggatgga
aggattaaagtgattggtggatctaatgttgagggccttcttttttctcctaagccatta
ccattcaagaatttggagttcctgcaaaaccaaggatttttagtgggcgtctcaaatgga
aatgaaattcaggtttgggatctagaaaacaggagaatgtcttctaatttacaatgggag
tccaatattactgcattctccatgatctatgacactcattacatgtttgtgggcgatgaa
tatggttatctctctgttctgaagtacgagagcagagaagggagcttggaactgctacct
tatcacattcctccaaatcttatagctgaagctgctgagatttcaatgcctgatcaacta
gccattgttggtttacttccccaacctagttcacttggaaatagggtcctaattgcttat
gagaatggattaattattctctgggacgttacagaagatcgagctgttcttgttaaaaag
tataaacagctccatgtgaaggatgaaattgttgttcatgcttcaaaaaatgcaagtgaa
gagaagtttcgtggttcatcagataatcaagagggggaaaaggaaataagctcactctgt
tggttgtcatctgatgggtcaattttggctgttggttatgttgatggagatatcttgttg
tggaacttatcagttcctggcaagaaaagttcagaggctgaagcatcatctagttatgtc
aagctgcagctctcagcaggagatagaagactccctgttattattctgcgttggtctgct
aacaatgcacagaatggttgtgggggccaattgtttgtctatggtggtgatgcaattgga
tcagaggaggccttgacggtcttgaatcttgattggtcctctgggatagcagcactgaaa
tgtgttgaaagagtagaccttggacttgatggatcttttgcagatgccattgtagtttca
aatgctaatggaacaggaattgatgatgcttcttccttgtttgtgttgacaaatccaggg
caactgcacttttatgacaagacaagcttatctgctttaaaatctaacccaaagaagaag
catgcagattttgctgttaggtgtcctacagttgtacctacccttgaaccacgtataact
gtggcaaacctatatccagtggataggaaatggaattcctcaaggactccttccgaggaa
gttatgaatgcacaactccatccagctcatggtgtgactgaacgggagatcaaaatgcct
ctaagtggtagtattgccggacaacttcctcttactgaggatggtggaatagagagaata
cttgttgctggctatctggatggatctgtccgtctgtggaatgcaacatttccagtcttt
tcacttatagctattctggaagctcaggtggagggcattcaagacactggtcctagaaca
gcaatatctgctttggatttctcctccactgctttaactcttgccattggccaccaatgt
ggccaggttcgtgtttctagcctcatggggcagtctaagacaactagcttgaacttggtt
ccggatactgaacaggatgttcagtactgtccaggtgatgctggctttcagttttccctt
gtaaaatctccagtaagcatcctaaaatttgtagctgtgggttccagacttgtcgcagga
tttgaaagcggccaggttgccatgcttgatattagttcatcatcagccttgttcgttacg
gattgtttatctagttcaagttccggaatcacttctgtggctgtgaaaacattagctgat
gctcgtgaagacactgtggaccactgtgaagagggaacaacaaatgcacatccgaaagaa
gttatttcagtattaaccagagatgcagaagtgattttgctcgatggctccactggcaat
aaaattagctctcaggcaaaacacacaaaggaaatgtcaactgctatatctctgtatatt
ttagatgacatcacctctgtctctgaagagttgcaaaagcattcttcaacgctagacagt
gctgtgcagcctgaagatttgagacagaaatgtgtggattaccaaattttgctttgttgt
cagaatggcttgcatttgttctctttaagttctataattcagggcggtgtcaaccctatt
cgtgaagttaaacttgctaaaccgtgttcttggacttccattcttaagaatgatgctgaa
aaatatggactggttttagtatatcagagtggagcagttgaaataaggtccttgccggat
cttaacgtcttgggagaatcctcattaatgtctatacttcgatggaattccaagataaac
atggataagaccataagttctcctggtaaagggatgatttcactggtgaatgggtctgaa
tttgctattttatctctgttggccttcggaaatgatttcaggattccggaagctttaccc
ccgcttcataataaatctctcgcagctgctgcagatgatgctgtcagtacatcccaacat
caaaagaagaaacagaatgctaccgtcggtagttttggtggcatcatgaaggggttgaaa
gggtttaaaggacagcaggctgctgattacagtaacgctcgagattctcttgttactcat
ctggaaaacatattctctagatttccattctcagaccctacaaatgtaatggatgacctt
ggaagcctggaactgaagttagatgatattgaaattgatgaacctgttcatgttacttca
tcatctctcagcagtgatgatgtcagaaaagaaaaggagaccgatagagacaggttattg
gaaggtggtattggtgatgccaagccacgacaaagaactcgtgaagaaatcattgctaaa
tatagaaacaagggggatgctgcctctgctgcagcggaggcaaaagataagcttcttgag
cgtcaggagaaactcgagaggctcagtaaaaacactcaggagctacaaagtggggccgaa
aactttgcagatctcgcaggtgagctcgtcaaggccatggagaaacgcaagtggtggaac
ctataa
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