Nicotiana tomentosiformis: 104105655 Help Entry 104105655         CDS       T05025                                  Name (RefSeq) uncharacterized protein   KO K12867   pre-mRNA-splicing factor SYF1 Organism nto  Nicotiana tomentosiformis Pathway nto03040   Spliceosome Brite KEGG Orthology (KO) [BR:nto00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104105655  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nto03019]     104105655    03041 Spliceosome [BR:nto03041]     104105655 Messenger RNA biogenesis [BR:nto03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      104105655 Spliceosome [BR:nto03041]  Complex B   Other components    Prp19-related factors     104105655  Complex C     104105655 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 ARM_TT21_C TPR_19 ARM_TT21 Motif Other DBs NCBI-GeneID:  104105655 NCBI-ProteinID:  XP_009612309 LinkDB All DBs Position 1:complement(1106930..1115211) Genome browser AA seq 914 aa AA seqDB search MSIPKELYPSQDDLPYEEELLRNPFSLKLWWRYLVARADSPFKKRAVIYERALKALPGSY KLWHAYLRERLELVRNLPVTHSQFQTLNNTFERALVTMHKMPRIWIMYLVSLTEQKLVTR TRRTFDRALCALPVTQHDRIWEPYLVFVSQRGIPIETSLRVYRRYLKYDPSHIEDLLEFL LNSELWQEASERLAGVLNDDQFYSIKGKTKHRLWLELCDLLTQHATEISGLNVDAIIRGG IKKFTDEVGRLWTSLADYYIRRKLVEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESML ALKMEEMSDSEVEDEESNGEVGVEEDVDEEDDRLNVAKLEKKLREFWLNDDKDVDLRLAR LEHLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTIDPMKAVGK PHTLWVAFAKLYENHKDIANARVIFDKAVQVNYKTVDHLASVWCEWAEMELRHRNFKGAL ELMRRATAEPTVEVKRRVAADGNEPVQMKLHKSLRLWLLYVDLEESLGTLESTRAVYERI LDLKIATPQIIINYAVLLEDHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK SKLERARELFEHAVEEAPADAVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPANEKLS MYEIYIARAAEIFGVPRTREIYEQAIESGLPDKDVKVMCLKYAELEKSLGEIDRARALYK HSSQFADPRSDTDFWNKWHEFEVQHGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQKD QMQTLEEAKDVLKKAGVADDEMAALERQLVPPEDEAKGKEQSRVVGFVSAGVVESNGQKV TTNNEDIELPEESDSEEEEKVEIAQKDVPAAVFGGLIRKREEGDEAEDDSAAKNKDSDGH LGALERIKRRRQGS NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atgtcaatccccaaagagctctaccctagccaagacgaccttccttacgaggaagagctc ctccgcaacccgttcagcttaaagctgtggtggcgttatctagtggcacgagcagattcg ccattcaaaaaacgagcagtgatttacgaacgagctctaaaagctctacccggaagttac aaattatggcatgcgtatctccgcgaacgcctcgaattagttcggaatcttccagttact cactcgcagttccaaaccctaaacaacactttcgagagagctctcgttacgatgcacaaa atgccgcggatttggatcatgtacttggtaagtttaactgagcaaaagctcgttacccga acccgacgcacatttgatagagcattatgtgcattgcctgttactcagcatgataggatt tgggaaccttatttagtgtttgttagtcaaaggggaattcctattgaaacttcacttagg gtttataggaggtacttgaagtatgacccttcacatattgaggatttgcttgagtttttg ttgaattccgagctgtggcaggaggcgtccgagaggttagccggtgtattgaatgatgat cagttttattctattaaagggaagactaaacataggctttggttggagttgtgtgacttg ttaacacagcatgctactgaaatttcgggtttgaatgtggatgccataatacgaggaggg attaagaagtttacggatgaggttgggaggctttggacgtctttggcggattattacata aggaggaagttggttgagaaggcaagggatattttcgaagaagggatgaccactgtggtc actgttagggattttagtgttatttttgatgcatactcgcagtttgaggagagtatgctt gccttgaaaatggaggagatgagtgacagcgaggtggaggatgaagagagtaacggtgag gttggggtggaggaagatgtggacgaggaggatgataggttgaatgtggcaaaattggaa aagaaacttagagagttttggttaaatgatgataaggatgttgatttgagattagcgaga ctagagcatcttatggataggaggccggaacttgcgaatagtgtccttctaaggcaaaat ccacataacgtggaacaatggcatagaagggtaaaactttttgaagggaatccgacgaag caaatattaacatacactgaggcagttagaactattgacccaatgaaggctgtgggaaag ccacatactttgtgggttgcatttgcaaagctttatgaaaaccacaaggatattgcaaat gcaagagtcatctttgataaggcagttcaggtgaactacaaaactgtggatcatcttgct agtgtttggtgtgaatgggcagagatggaactacggcacaggaatttcaagggtgctctg gaactgatgagacgtgccactgctgaaccaactgttgaggtcaagaggagagttgctgct gatggaaatgaaccagtgcagatgaagttacacaaatctctaaggctttggttattgtat gtggatttggaggagagtctaggaaccttagagtcaactcgcgcagtatatgagagaatt ttggatctgaaaattgctacaccccagattataatcaactatgcagtacttctggaggat cataagtactttgaggatgcattcaaggtttatgagaggggtgtgaagatcttcaagtac ccacatgtaaaggatatatgggttacctatctttccaaatttgtgaagagatatgggaag tcaaagctggaacgagctagagagttatttgagcatgctgtagaagaggcccctgctgat gctgtgaagccattgtatcttcaatatgctaaattagaggaagactatggtcttgccaag cgggctatgagggtgtatgatcaagctacaaaagctgttccagcaaatgagaaattgagc atgtatgagatttacatagctcgtgcggctgagatatttggtgttccaagaacaagggag atatatgaacaagcaattgagtccgggcttccagacaaggacgtgaaagttatgtgctta aagtatgctgaactggagaagagcctgggagagatcgaccgtgcccgtgcactatacaaa cactcatcacaattcgcagaccctagatcagacactgatttctggaataagtggcatgag tttgaggtgcagcatggaaacgaggataccttccgtgagatgctccgtgtgaagaggagt gtatctgcaagctacagccagacacattttatcctacccgagtatctcatgcaaaaggat cagatgcagacccttgaggaagcaaaggatgtgttgaaaaaagctggtgttgctgatgat gagatggcagctcttgagaggcagttagtgcccccagaagatgaagcaaagggcaaagaa cagagtcgggtagttggatttgtaagtgcaggagtagttgagtcaaatggacagaaagtg acgacaaacaatgaggatattgagctacctgaggaaagtgattcggaagaggaagagaag gttgaaattgcgcagaaggacgtccctgctgcggtgtttggaggtttaatccgtaagagg gaagaaggtgatgaagcagaggacgactctgctgccaagaataaagatagtgatggccat cttggcgctctagaaagaataaaacgaaggagacaaggctcttag

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