Nicotiana tomentosiformis: 104105790
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Entry
104105790 CDS
T05025
Name
(RefSeq) AP-4 complex subunit epsilon isoform X2
KO
K12400
AP-4 complex subunit epsilon-1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
104105790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104105790
Membrane trafficking [BR:
nto04131
]
Endosome - Golgi transport
Others
AP-4 complex
104105790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
HEAT
Cnd1
HEAT_2
INTS1_R4
HEAT_EZ
TOR1L1_N
HEAT_GCN1
PIK3R4-like_middle
PDS5
HEAT_GCN1_C
RGS
NPHI_C
HEAT_EF3_N
DUF4290
Motif
Other DBs
NCBI-GeneID:
104105790
NCBI-ProteinID:
XP_009612476
LinkDB
All DBs
Position
8:complement(67896676..67912811)
Genome browser
AA seq
965 aa
AA seq
DB search
MGSQGGFGQSKEFLDLIKSIGEARSKAEEDRIVINEIETLKKRIIEPDIPKRKMKEYIIR
LVYVEMLGHDASFGYIHAVKMTHDDNLHLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNYLVVCAALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAVMALHRFFQKSPSSV
SHLVSNFRKRLCDNDPGVMGATLCPLYDLIAADVNSYKDLVVSFVSILKQVAERRLPKSY
DYHQMPAPFIQIKLLKILALLGSSDKKASEQMYTIVGDIMRKSDSTSNIGNAILYECICC
VSSIHPNPKVLESAAEAVAKFLKNDSHNLKYLGIDALGRLIKISAEIAEQHQLAVIDCLE
DPDDTLKRKTFELLYKMTKPSNVEVIVDRMIDYMMSINDNHYKTEIASRCVELAEQFAPS
NQWFIQTMNKVFEHAGDLVNLKVAHNLMRLIAEGFGEDDDTADTQLRSSAVESYLRIMGE
PKLPSAFLQVICWVLGEYGTADGKYSASYITGKICDIAEAHSTDDMVKAYAVSALMKVYS
FEIAAGRKVDMLPECESFIEELLASHSTDLQQRAYELQAVVGLDARAVENIMPMDASCED
IEVDRELSFLNGYVQESLNKGAQPYIPENARSGALTISNFRHEEQHGSSGHSLRFEAYEL
PKPSVPSRPSPVPPVFSTELVPVPEPTYHTEFHEAVAPKLSASGTGSSEIKLRLDGVQRK
WGKQTYSSSSPSTSDSDTYKTQNGATQRDVPSSLSSKTRDVSYESRRQQEDINPEKQKLA
ASLFGGASKSEKRPAGAGHKASRPNSHTADKSHAEKTGPSDGGAAKASPQPPPDLLDLGE
PTSISSATSVDPFKQLEGLLDLNEGTPAPGSSGDSATKAPDFMSLYGNTSFRGQNMMGTE
NLLSTAAFSLASDRNGHGTGSTVTNSTQLSKGPNHKDALEKDALVRQMGVTPTSQNPNLF
KDLLG
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccaaggcggatttggacagtccaaagagtttctcgacctaatcaaatccatc
ggcgaagcccgatccaaagctgaagaagatcgaatcgtgattaacgagatcgaaaccctt
aaaaaacgaatcatcgagcctgatatacctaaaagaaagatgaaagagtacataatacga
ttagtgtatgtcgagatgttaggccacgatgcatcgtttgggtacatacatgctgtgaaa
atgacacatgatgataatttgcatcttaaacgtactggttatttagctgtgacgcttttt
ttgaatgaggatcatgacttgattatcctgattgtgaatactattcagaaggacttgaaa
tcggataattatttggtggtttgcgccgcattgaatgccgtttgtaagttgattaatgag
gagactattccagcagtgttgccacaggtggtggagttgttagggcattctaaagaagct
gttaggaaaaaggctgttatggcacttcatcgtttttttcagaaatcgccatcgtccgtt
agccatcttgtctccaatttcagaaagaggctatgtgacaatgatcctggcgtaatgggt
gctacactttgtcctctttatgatcttattgctgcagatgttaattcttacaaggatttg
gttgtcagctttgtaagcattctaaaacaagtagcggaacggaggttacccaagagttat
gattatcatcagatgccagctccattcattcagatcaaattgttgaaaattctggcatta
ctgggaagcagtgacaaaaaagccagtgaacaaatgtatactattgttggtgacattatg
agaaaaagtgattcaacaagtaatataggaaatgctattctatatgagtgcatatgttgt
gtttcctcaatacatcctaaccccaaggtattagaatctgcggcagaagcagttgccaaa
tttttgaagaatgatagccataatctaaagtacttgggcattgatgcgcttggtagattg
ataaagataagcgcagaaattgctgagcagcaccaactagcagtgattgattgtttagag
gacccagatgacacactgaagcggaagacttttgagctgctgtataaaatgacaaagcca
tcgaatgtagaagttattgtcgaccgtatgattgattacatgatgagtataaatgataac
cattacaaaactgagatagcctccagatgtgtcgaactggctgagcagtttgcaccgagc
aatcaatggtttatccagaccatgaataaagtgtttgagcacgcaggagatctagtgaat
ttaaaggttgcccacaacttgatgcggctaattgccgagggatttggagaagatgatgat
actgcagatacccagctgagatcatcagctgtggagtcatatttgcgcatcatgggagag
ccaaaacttccctctgcatttctccaagttatttgctgggtcttgggggagtatggaact
gctgatgggaagtattctgcctcctatatcacagggaaaatatgtgatattgctgaggct
cattcaactgatgacatggtcaaggcgtatgcagtatcggcgcttatgaaagtatattca
tttgaaatagcagctgggaggaaagtggacatgttgcctgagtgtgaatcattcattgaa
gagttattagcatcacactcaacagatttacagcaacgagcatatgaacttcaagcagtt
gttggcttagatgctcgtgctgttgaaaatattatgccaatggatgctagttgtgaagac
attgaggttgatagagaactatcttttctcaatggttatgttcaagagtcactgaataag
ggggctcaaccctatattcctgagaatgcgcgatcaggagctttaactatcagcaatttt
agacatgaagaacagcatggatcctcaggacattctcttagatttgaagcttacgagctt
cctaaaccctctgtgccatcaagaccttctccagtcccaccagtattctcaaccgaactt
gttcctgtaccagaaccaacttatcacacagagtttcatgaagctgttgcaccaaagttg
tccgcatctggtacaggctcatctgaaatcaagctacgacttgatggtgttcaaagaaag
tggggtaagcaaacttattcttcttcctcaccatctacttcagattctgatacctataag
actcagaatggagcaacacagcgtgatgtaccaagcagcttaagctcaaaaacacgtgat
gtatcatatgaatccagaaggcaacaagaggatattaatccggaaaagcaaaaacttgct
gcttccctctttgggggcgcatcaaaatctgaaaaaagacctgctggtgctgggcacaag
gcatcaaggccaaacagccatactgcagacaagtctcatgcagaaaagactggaccttct
gatggaggtgctgctaaagcaagtccccaaccacctccagacttgcttgacttgggtgaa
ccaactagtattagtagtgcaacttctgtggatccgtttaagcaattggaaggcttgctt
gacttaaacgaaggtactccagctccaggttctagtggagatagtgctactaaagcgcct
gattttatgtctctttatgggaatacttccttcagggggcagaatatgatgggaacggaa
aatctcctttcaactgctgcattttcacttgcatccgacagaaatggccatggaacaggt
agtacagttacaaattcaacacaattaagtaagggcccgaatcataaagatgctttggaa
aaagatgcacttgtgaggcaaatgggtgtgacaccaacgagtcagaatcccaacttattc
aaggatttgcttgggtaa
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