Nicotiana tomentosiformis: 104105975
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Entry
104105975 CDS
T05025
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03015
mRNA surveillance pathway
nto04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104105975
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104105975
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nto01009
]
104105975
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104105975
03036 Chromosome and associated proteins [BR:
nto03036
]
104105975
Protein phosphatases and associated proteins [BR:
nto01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104105975
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104105975
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104105975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
104105975
NCBI-ProteinID:
XP_009612715
LinkDB
All DBs
Position
3:147423251..147431713
Genome browser
AA seq
518 aa
AA seq
DB search
MNGGDGGDVAAAPAGPPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDR
GGRVVLFERTDTKEHIGSRRELERMDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQSPNGALFLLSTNDKTIKFWKVQEKKVKKLSDMTIDPPRAVGNGSVASSSVSSS
PKQCLANGGNADRSFNCLSNDLSFPPGGISSLRLPVVVTSNETSLVARCRRVYAHAHDYH
INSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTHC
NTLAYSSSKGSIRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFSKDGRY
ILSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVAT
GSYSNLFRVFGCAAGTTEATTLEASKNPMRRQVQTPLRPSRSLSSSITRVVRRGSESPGV
DANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatggtggagatgtcgcggcagctccggcgggtccaccaccgccgctt
gagtggaaattctctcaggtatttggtgagcgtacggccggcgaggaagttcaggaagtt
gatatcatctccgcaattgagttcgataaaactggtgaccatcttgctactggagatcgt
gggggtagggtggtattatttgaaaggactgatacaaaagagcatattggtagtcgaaga
gagcttgagagaatggactatcctgtgagtcgccatccagagttccgctacaagacagaa
tttcaaagccatgaacctgagtttgattatctgaagagtttggagattgaggagaaaatc
aacaaaatccgttggtgccaatcgcctaatggtgcactctttcttctatctaccaacgac
aaaaccataaagttttggaaggtccaagagaagaaagttaagaagctatccgatatgact
attgatcctcccagggctgttgggaatggcagtgtggccagttctagtgtttcttccagt
ccaaagcagtgtcttgcaaatgggggcaatgcagatagatctttcaattgcttgagcaat
gatttgtcgtttccacctgggggcatttcctcattacgtttacctgtggtagttacaagt
aatgagaccagccttgttgcaaggtgcagaagagtgtatgctcatgcacatgactatcat
atcaactctatttcaaataacagtgacggcgaaacatttatatcggctgacgatctccgg
ataaacctttggaacttggaaataagcaatcagagtttcaacattgttgatgtcaagccg
acaaatatggaagatctaactgaggtgataacttcagcagaatttcatcctactcactgt
aacactttagcttatagtagttcaaaagggtcaattcgtctcatagatctgcggcagtca
gctttatgcgactcacattctaaattgtttgaggaacaagaagcacctggttcaagatct
tttttcaccgagataattgcttcaatttcagatattaaattttctaaggatggaagatac
atactcagtcgtgactatatgaccctaaagctatgggacataaatatggattctggtcca
gtatcaaccttccaggttcatgaatatttgagaccaaagctatgtgatttatatgagaac
gactccatttttgataagttcgagtgttgccttagtggtgatgggctgcgagtagcaact
ggttcttatagcaatcttttccgtgtgtttggttgtgctgcggggactactgaagctact
acactggaagctagcaaaaaccccatgagaagacaagtgcagacccctttaaggccttcc
aggtccctgagcagtagcataacacgtgtcgtcaggagaggatcagagagtccaggggtt
gatgcaaatggaaattcatttgatttcacaacaaagctcctccatctagcatggcatcca
actgaaaattcaattgcctgtgccgctgcaaacagcttgtatatgtattacgcataa
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