Nicotiana tomentosiformis: 104106080
Help
Entry
104106080 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
nto03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104106080
03015 mRNA surveillance pathway
104106080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104106080
03041 Spliceosome [BR:
nto03041
]
104106080
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104106080
Spliceosome [BR:
nto03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104106080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
104106080
NCBI-ProteinID:
XP_009612859
LinkDB
All DBs
Position
7:complement(76938809..76949990)
Genome browser
AA seq
873 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVMKPWIAKRVTELI
GFEDEVLINFIYGLLERKVVNGKEVQISLTGFMERNTGKFMKELWALLLSAQNNASGVPQ
QFLEAKEEEMRKKKAETDRIANEIQKKKERESRELDQEKRKMMDDYASNSRQKNAALEPS
PKHQPRVRSTDDLDHVDRNGSRRIHRVSRSPRSAHHSPSPRRSRSISKSFSNSRSYSGER
RRSRSTSGSPLERRGRSLSSERVYRSPPRRSVSPRRKHSPQQSLSPPRHRQRSTSRVRQG
SPSVARYRRRSPFRRRRSPIRCRSRSPIQRRSRSPIRRRSRSPMWRRSRSPSRRSPVRYR
SRSSIRCRSPLRRRTPNPTKRRSPSPVGRGYHRSPLSPRSSLSPAQRKSFISGRKRSLTP
ARRSISPQGSLSPSPIYHKFPSPIRKRILKNESSPVQSPRGRIRSREKYSPIRHAPPVKT
EAHKGSRSLERRRPISSRSPQRDIYDLKDSRKKESLLPPRRRRSPSVSESPRSRSASESL
PTKRERSPSENRGPRSTLNQRERKTIDTDSPNPRKLREHRVSSNISEKIADEKEMNHSRE
AFEHKPRSSRQIPTTPDPNKDLGKGRDEEEFSEFHSHSDRLESRKRNEVMKSEKFSAMME
QTKELDQQKSPSIHRHSHSVKRERESYAGESFKAEKENLSHANYIKGKELLESETPLTSS
RKAEQNDQSGDDGSGSEESEKRRAKVKEKRKHKRSGKYESSSDDSYDSDVEGRKEAKRRR
KEERRWKKEEKRRRREERQRRKEERHAQKLKLKSANAMSSPSDTERNPDCHASYDEHLRK
GDVEESESVQKRLEIELREKALESLRAKKGISH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggtttttccggggcacgtcggccgagcaggacactcggttctctaataag
caagccaagctgttgaaatctcagaagttcgctcctgaattggaacatctggtggacatg
accaaggtgaagatggatgtaatgaaaccatggattgccaaacgagttaccgagcttatt
ggttttgaagatgaagttcttatcaatttcatttatggccttcttgaacgaaaggtagtt
aacggcaaggaggttcaaatttcacttactggattcatggaaagaaacactggcaaattt
atgaaagagctttgggcgctactacttagtgcacagaacaatgcaagcggtgttcctcag
cagttcctagaagccaaagaagaggaaatgagaaagaagaaggctgagactgatcgaatt
gccaatgagattcagaagaaaaaggagagagagagtagggagctggatcaagagaaaagg
aagatgatggacgattatgccagcaattcgagacaaaaaaatgctgcactggagccaagt
ccgaaacaccagcctcgggtgcgctcgacagatgatttagaccatgttgacagaaatggc
tcaagaagaatacacagggtctctagatccccacgttcagcacatcattcaccctccccg
aggagatcaaggtcaatcagcaagtcattttctaattcaaggagttattctggtgaaagg
cgcaggtcacgaagtacatccggatctcctttagaacggagaggtcgctcactttcatct
gaaagggtataccgctctccaccaaggcgctctgtttcacctcgtaggaagcattcacct
caacaatctctctctccaccaagacacaggcaaagatcaacctcccgagtacgtcaaggg
tcaccttctgttgcgcggtatcgaagacgttctccattccgacgtaggaggtctcccatt
cgatgtagatcgaggtctcccattcaacgtagatcgagatctccgattaggcgtagatca
cgatcccctatgtggcgtaggtcacggtctccaagtagacgctcaccagtgcgatataga
tcaaggtcatctattagatgtcgatcaccacttcggcgcagaacaccgaatcccacaaaa
cgtaggtccccttctccggtgggtcggggttaccaccgatctccattgagtcctcgaagt
tctctatctccagctcaacgaaaatccttcatatctggcaggaaaagatccttaacccct
gccagaaggtctatttcacctcaaggatcactttctccctcacccatttaccacaagttt
ccttcaccaatcagaaagagaatattgaagaatgaaagttcaccagttcaatctcctcgg
ggaaggataaggagccgtgaaaaatactcccctattcgacatgcccctccagtaaaaact
gaggcgcataaaggatccagatcattggaacgtagacgtcctatttcttctaggtcacca
cagagggacatatatgaccttaaggattcacgaaaaaaagagtcgcttttgcctcctcgg
cgacggcggtcaccatctgtttcagaatctccacgctccagatcggcctcagaatctcta
ccaacaaaaagggaaaggagtcctagtgaaaatagagggccaaggagtactttgaaccag
agggagagaaagacaattgacactgacagcccaaatcccaggaaattgagagagcacaga
gttagttctaacatttctgagaaaattgcagatgagaaagaaatgaaccattcaagggag
gcctttgagcataaacctaggtcttcaagacaaattcctacaacacctgatccaaataaa
gatcttggaaaggggcgggatgaggaagaattttctgaatttcatagccattcagatcgc
ttggagtcaagaaagcgaaatgaagtgatgaagagtgaaaaattttccgcaatgatggag
caaacaaaggagctggatcaacaaaagtcaccatcaatccatagacactctcattcagtt
aagagggaaagggaatcatatgccggggagagcttcaaagcagagaaggaaaacctgtct
catgcaaactatatcaagggcaaagagctacttgagtcagaaactcccctcacttcatca
aggaaagctgagcagaatgatcaaagtggtgatgatggttctggttctgaggaaagtgaa
aagcgtagagctaaagttaaggaaaaaagaaagcataagaggtctggcaaatacgagtca
tcgtcagatgatagttatgactctgatgttgagggtaggaaggaggctaaaaggaggagg
aaagaggagaggagatggaagaaagaagagaagcgtaggcggcgggaggagagacagcgc
agaaaggaagaaaggcatgcccagaaactaaaattgaagtcagctaatgccatgtcttcg
ccatcagatacagagagaaatcctgattgccatgcttcttatgatgagcatctgaggaag
ggggatgtcgaggagtcagagtccgtgcagaaaaggcttgagattgagctgcgggagaag
gctcttgaatctctcagagcaaaaaagggcatcagccattaa
DBGET
integrated database retrieval system
