Nicotiana tomentosiformis: 104106349
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Entry
104106349 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K08518
syntaxin-binding protein 5
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104106349
Membrane trafficking [BR:
nto04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104106349
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
104106349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
Synaptobrevin
WDR55
Lgl_C
Beta-prop_RIG_2nd
TFIIIC_delta
Beta-prop_HPS5
Beta-prop_IFT140_1st
ABC_tran_Xtn
Motif
Other DBs
NCBI-GeneID:
104106349
NCBI-ProteinID:
XP_070037873
LinkDB
All DBs
Position
7:100119055..100139564
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AA seq
1111 aa
AA seq
DB search
MFAKKLFQKATQYHHNQHQQRNGSGLTAIDLNVRATVHYGIPSTASILAVDPIQRLLAIG
TLDGRVKVIGGDNIEGLLISPKQLPYKYLEFLQNQGFLVSITNENDIQVWNLKSRSVACD
LQWKSNITAFSVINGSSFLYVGDEYGTISVLKFCVENRELLQLPYQILWSSLSEAAGFAN
ADHQPVVGILPQPFTSGNRLLIAYESGLIILWDVVEAHVIIVKGDKDLHLKDGAVNFKKN
ADSSSPDDLLQHEFEEKEITTLCWASTDGSILAVGYIDGDILFWKTSKSTLSKGQEAGPF
DNVVKLQLSSAEKRLPVIVLNWWANSKSRNSSDGHLLIYGGDEIGSDEVITILTLDWSSG
METLKCVGRVDLTFSGSFADTILLPTTGTAATDEKAALFVLMSPGQLKLLDCSSLSDLVS
KELKKVSLSAEDFPVELPTVDPSMTVTKLTQLHSDGNLPELLQETPLFKKFCTATSSGAN
GWPLTGGVYNHISQAETNRIQRVYIAGYQDGSVRMWDATHPVFFLLCVLDNEVKGVNTVI
STASVSKIDFCFQTLRLAVGDECGLVRLYDFKHSDMENFHFITDAKSEVHELAQGQGPSC
RAVIKLLDVRVRAIEFINHGAKLAVGYENVKVAVLDMTSLSVLFLTDSVSVGSSPLVSVI
AKRFMHSDGHSKSPKQSELPENHMEELMFVLTEDAKIYVIDGGSGKTSSLEPLHLKKVST
AISMYVIENNTPFSGIISKKPQSSKDDANSNEPSQDMTTSDQCDTAPFLQNDPSRKHFEE
SFVLLCCKDAIRTYATKSVVHGNNKSVCKVKLDKPCCWTTTFMKDGKVCGLLLLFQNGDI
EIRSLPDLELVEQTSLMSVLRWNFKLNMDRAMSSMENGHVTLANGSELAFVSLLASENDF
RIPESLPFLHDEVLAAAADAAIKFSTQKKKQGSGPNIIGTLVKGFKVGKTNHNMDLSEMS
KSNFSHLEGIFMKNPLNPEPSPIITKEVQGAVELDIDDIEIDDPVPVAPTSSHSTQNSKR
GTERGKLLDSEGDDVKPRLRTREEIIAKYRKAGDASSAAGEARNKLLERQEKLERISQRT
DELRSGAEDFASLANELVKVMENRNRKWWQI
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgaagaagcttttccagaaagccacacaatatcatcataatcaacatcaacag
cgaaatggcagtggtttgacagcaattgacctgaatgttcgtgctactgtacattatggt
atcccgtcaacagcatcaattcttgcagtagatcccatccagcgcctattggccattgga
acgttggatggtagggtaaaagtgattggtggggacaatattgaaggtctcttgatttct
ccaaagcagttgccctataaatatttagagttccttcaaaaccagggttttcttgtcagc
atcacaaatgaaaatgatatccaggtttggaatctcaaaagcagatctgtagcttgtgat
ttgcagtggaaatcaaatataactgctttctcagttatcaatggctcttccttcttgtat
gttggagatgaatatggaacaatctcagttttgaagttctgtgttgagaacagagagctt
ctgcaactgccatatcagatcttgtggagttctctttctgaagcagctggttttgcgaat
gcagatcatcaaccagttgttggaattctcccccaaccttttacgtcaggaaatagatta
ttgattgcatatgagagtggtttaattatactatgggacgtcgttgaagcccatgttatc
attgttaaaggtgataaagatctccatttgaaggatggtgctgtaaactttaaaaagaac
gcagattccagctctcctgatgatttattgcagcatgaatttgaggagaaagagataacc
acactttgctgggcatccactgatggatccattcttgctgttgggtacatagatggagat
attctgttttggaaaacatcaaaatcaaccttaagcaaaggtcaagaagccggaccattt
gataatgttgttaagctacagttgtcttctgctgaaaaaaggcttcctgtcattgtctta
aactggtgggcgaacagtaaatcccggaatagcagcgatggccatctcctcatttatggc
ggtgatgaaataggatccgatgaagtcattacaattcttacccttgattggtcatctgga
atggagactttgaaatgtgttggtcgtgttgacctcacttttagtggctcatttgccgat
acgatcttattaccaactactgggacagcagcaactgatgaaaaagctgctttatttgtg
ttgatgagtcctggacaactaaaacttttggattgttcaagcttgtctgacttggtatcc
aaagagttgaagaaagtatctctatcagctgaggattttcctgtagaattaccgacagtt
gatccttccatgactgtgacaaagcttacccagttgcattcagatggaaacttacccgag
cttcttcaagagacacctttattcaagaagttctgcacagcaacatcatctggggctaac
ggatggcccttaactggaggggtgtataatcatatttctcaagctgagactaacaggatt
caaagagtttatatagcaggttaccaggatggatctgtaaggatgtgggatgccactcat
ccggtcttctttctcctttgtgtcttggataatgaggttaaaggtgtaaatacagttata
tcaaccgcttcagtttcaaaaatagatttctgcttccagacattaagattggcagttggg
gatgagtgtggtctggtacgcctttatgatttcaaacatagcgatatggagaacttccat
tttattactgatgctaaaagtgaagttcatgagttggcacaaggtcaaggacctagctgc
agagctgttataaagcttctcgatgttcgcgtccgagcgatcgaatttataaatcatgga
gccaaacttgcagttggatatgaaaatgttaaggttgcagtgcttgatatgacttcatta
tcagttttgttcttgacagattccgtatctgttggtagctctccactggtctcagtgatt
gcaaagagatttatgcatagtgatggtcatagcaaaagcccaaaacaatcagagcttcca
gaaaatcatatggaggaactcatgttcgttttaactgaggatgcaaagatctatgtaatt
gatggtggtagtggtaaaacgtccagtttagagcccctgcatttaaagaaagtgtcaaca
gcaatttctatgtatgtcatagaaaacaacaccccattttctggtataataagtaagaag
ccacagtccagcaaggatgatgcaaatagtaatgagccttcacaggacatgaccactagt
gatcaatgtgatacggctccctttctacaaaatgacccctccaggaaacactttgaggag
tcctttgttctactttgctgtaaagatgcaatacgcacttatgctacaaaatctgtggtt
catgggaacaataaatctgtgtgcaaagtgaagctcgacaaaccttgttgctggacaact
acttttatgaaagatgggaaagtttgtgggctactattactctttcagaatggagatatc
gagattagatctttgcctgatctagagttggtggagcagacctccttaatgtcagtttta
aggtggaatttcaagctaaatatggacagggcgatgagttccatggagaatggccatgtt
accttggcaaatggttctgaactggctttcgtgtccctattagctagtgaaaatgatttc
agaattccagaatctttgccgtttcttcatgatgaagtgctcgcagctgcagcagatgct
gccatcaaattctccactcagaagaagaaacagggtagtgggccaaacattattggtact
ctcgttaaaggatttaaagtgggaaaaacgaaccataatatggatctcagtgagatgtct
aagtcaaactttagtcatctggaaggtatctttatgaagaacccactcaacccagaaccg
tccccaattatcactaaggaagttcaaggagcagtggagctcgatatagatgatattgaa
attgatgaccctgtccctgtggctcctacttcatctcatagcacacaaaatagtaaaaga
ggaactgaacgagggaagttgcttgattctgagggtgacgatgtcaagcccagacttagg
acacgtgaagaaatcatagcaaaatatagaaaagcgggggatgcatcatcagcggctgga
gaagctagaaacaagcttctagaacgccaagagaaacttgagagaattagccaaagaact
gacgaactacgcagtggggctgaagactttgcatcattggcaaatgagcttgtcaaggta
atggaaaatcgcaatcgcaaatggtggcaaatatga
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