Nicotiana tomentosiformis: 104106376
Help
Entry
104106376 CDS
T05025
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104106376
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104106376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
AAA_21
ABC_tran
DUF948
Motif
Other DBs
NCBI-GeneID:
104106376
NCBI-ProteinID:
XP_009613207
LinkDB
All DBs
Position
5:13558749..13585745
Genome browser
AA seq
1062 aa
AA seq
DB search
MEDRVPATGMPKRLEAGIISKIRLENFMCHSNLEIDFGDSVNFITGQNGSGKSAILTALC
VAFGSRARGTQRANTLKDFIKTGCSHALVHVEIKNRGEDAFKAETYGDLIIVERRISEST
GSIVLKNYQGKKVAAKREELQELIVHFNIDVENPCVIMSQDKSREFLHSGNAKDKFKFFF
KATLLQQVEDLLIGIQVQLKNANELVAELEKSISPIVKELDELQVKIRNMEHIEEISHQV
DLLKKKLAWAWVYSVDRQLQDKSKRIEELKGRIPTCQSRIDQHLRKMEELNDQLAKKKAQ
IAHLMEKTSEVRRMTEELKHSLSSATKEKLELEEEWRRRGNYIQKMAKRVKMLEQQIHDV
DEQNIRNTQAEEHDMEVKLEEFQAEVDKANVVFQRLKNEEVTLIEKINQAKEQISNIVHE
IEENDKKDRDIRSRIRELQLHKSNKVTAFGGGRVMGLLEVIERHHRKFQRAPIGPIGAHV
TLVDGDKWGIAIESAIGSLLNGFIVTDHKDSLLLRACAREANYNNLQIIIYEFSRPRLNI
PDHMLPRTHHPTAISVLRSDNPTVLNVLIDVVKLLFLWGNAERQVLVKDYDAGKAVAFEQ
RISNLKEVYTSDGYKMFSRGSVQTILPPMKNVRSGRLSGSYDNLIKTLESEASEAQMKAR
QTRGMKRSIDEELQGLQDNLQSAKKRRHDAERVLRSKEFRLQDFKKSYLAESSSTAVSTV
DELHVEQSKIRDEIHERENSLEELQVRLNEADTKANDVKISFENLCESAKVEIGALEEAE
RELMMIDKDLKDAELKKNHYEDVMSKKVLSQLKGAEEEYQELEHNRRESYKKASIICPEG
EIETVGGCDGSTPEQLSAQLTRLSQRLQQESRRHPESIEDLRMLYNKKERKILRKQQMYK
AFREKLGACHKALELRWSKFQRNATLLKRQLTWQFNGHLGKKGISGHIKVCYEEKTLSIE
VKMPQDSSSSSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKIS
LDAVVDFALAQGSQWIFITPHDISMVKQDERVKKQQMAAPRA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggaggatagggttccggcgacagggatgccgaagcgtctagaagcgggtattatttca
aaaatccggctggaaaacttcatgtgccatagtaacctcgagatcgatttcggtgactcc
gttaatttcattactggtcagaacggaagtgggaaaagtgctatactgacagcattatgt
gtggcatttgggagccgcgctagaggcacacaaagggccaatacactaaaggattttata
aagacaggctgcagccatgcccttgttcacgtggaaataaaaaaccgaggagaggatgct
ttcaaggcagaaacttatggtgacctcataattgtagagcgcaggatctcagagtctacc
ggttctatcgttctaaagaattaccaaggtaaaaaggtggctgccaaaagagaggaactc
caagaacttatagttcatttcaatattgacgtggaaaatccatgtgtaataatgagtcaa
gataaaagcagggaattcttacattccggaaatgccaaagacaagttcaagttctttttc
aaggcaacactacttcagcaagtggaagatcttctgattggtattcaggttcaattgaaa
aacgcaaatgaactagttgctgaactggagaaatcaataagtcctatagtgaaagaactt
gatgagttgcaagtaaagattagaaacatggaacatatagaggagatttctcatcaggta
gacttgttgaagaagaaattggcatgggcatgggtatacagtgtagacaggcagttacaa
gataaaagtaaacggattgaggagttgaaaggacggattcccacatgtcaatctcgaata
gatcagcatcttaggaagatggaggaattgaacgatcagttggccaagaagaaagctcaa
attgctcatttgatggaaaagacatctgaggtgaggaggatgacagaagagttgaagcat
agtctttcttcggctacaaaggaaaagcttgagctggaggaggagtggcgtcgtagaggt
aattacatccaaaagatggcaaaacgggtcaagatgcttgaacaacaaatacatgatgtg
gatgagcagaatattagaaatacacaggccgaagaacatgatatggaggtgaagctggag
gagttccaagctgaggttgataaggctaatgttgtatttcaaaggttgaagaatgaagaa
gttaccttaattgagaaaatcaatcaggcgaaggaacagataagcaatatcgttcatgag
attgaagagaatgacaagaaggatcgtgacatacgctctcgcattcgtgagcttcaactt
cataaaagcaacaaggttacagcctttggaggaggtagagtgatgggccttctggaggtg
attgaaagacatcatagaaagttccagagggcgccgattggtccaataggtgctcatgtg
accttggttgatggtgacaaatggggtattgctattgaaagtgccattggctcgctgctt
aacggttttattgtaacggatcataaggattcccttttattaagagcttgtgcaagggaa
gcgaattataataacttacagattatcatttatgagttctctagaccaaggttgaacatt
cccgatcacatgcttccccggactcatcatccaactgcaatttcggtcctacgttctgac
aatcctaccgtactaaatgtcttgattgatgtggtaaagttgctatttctgtggggtaat
gctgagaggcaagtacttgttaaagactatgatgctggaaaagcagttgcttttgagcaa
aggatttcaaatttgaaggaggtttacacttctgatgggtacaaaatgttttctcggggt
tcagtccaaactattcttccaccaatgaagaatgtgaggagtggacgtctttctggttca
tatgacaatctaattaaaactctagaaagcgaagcatccgaggcacagatgaaagctcga
caaaccaggggtatgaagaggagtattgatgaagagcttcaaggactccaagataatttg
caaagcgctaagaagaggcgccatgatgcagagcgcgttttgaggtccaaggagtttcgc
ttgcaagattttaaaaagtcatatcttgcagaatctagctccaccgctgtatcaacagta
gatgagcttcacgtcgagcagtcgaaaatccgtgatgagatacatgaaagagaaaattca
ttggaagagcttcaagtgaggctgaatgaagccgacaccaaagctaatgatgtcaaaata
tcctttgaaaatttgtgtgaatcagcaaaagtggaaattggagccttggaggaagcagag
cgtgagttaatgatgattgataaagatctaaaagacgcagaattgaagaagaatcattat
gaagatgtaatgagtaagaaggttctttcccaacttaaaggcgcagaagaagaatatcag
gaacttgagcacaaccgtagggagagctacaaaaaagcttcaatcatctgtcctgaaggt
gaaatcgagactgtaggaggctgtgatggaagcactccggagcaattaagcgcccaatta
actaggctaagtcaaagacttcagcaagagagtcggagacatccagagtctattgaggat
ctccgcatgttgtacaacaaaaaagaacgcaaaattttaagaaagcagcaaatgtacaaa
gcatttcgcgagaaactaggtgcatgccataaagccctcgagctacgatggagtaaattc
caaagaaatgcaactctcttgaagcgccaattaacatggcaatttaatggccacttgggt
aagaaagggatcagtgggcacatcaaagtttgttatgaagagaagaccctttcgatagag
gtaaaaatgccccaagattcatcaagcagcagtgttcgtgacacacgaggactttcaggg
ggagaacgttctttctcaactttgtgctttgcacttgctcttcatgagatgactgaagct
ccgtttagagcaatggatgaatttgatgtatttatggatgccgttagcagaaaaatcagt
ctagacgctgttgtggattttgcattggcacaaggatcacagtggatatttattacccct
catgacatcagtatggtgaagcaggacgagagggtaaagaagcagcaaatggcggctcct
cgtgcctga
DBGET
integrated database retrieval system
