Nicotiana tomentosiformis: 104106600
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Entry
104106600 CDS
T05025
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104106600
03009 Ribosome biogenesis [BR:
nto03009
]
104106600
Spliceosome [BR:
nto03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104106600
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
90S particles
RNase
104106600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
104106600
NCBI-ProteinID:
XP_009613473
LinkDB
All DBs
Position
4:78768368..78793969
Genome browser
AA seq
410 aa
AA seq
DB search
MRIAVEGCMHGDLDNVYATLLQLQEVENIKIDLLLCCGDFQAVRNEKDLESLNVPLKYRS
MNSFWKYYSGEKVAPFPTIFIGGNHEASNYLWELYYGGWAAPQIYFLGFAGVIKFGNVRI
GGLSGIYKSHDYNRGHYEKLPYNQRDIRSIYHVREYDVHKLLQVEEPIDIFLSHDWPVGI
TDCGNLKALLRQKPFFEQEIQEGTLGSRPAAELLAKLTPSYWFSAHLHCKFAALVQHEKD
GPSTKFLALDKCLPGRKFLQVIEIESGPGPHELQFDEEWLAITRKYNAVLPLTIRSANYS
DVHLDTEECHQFVRNKLQTRGSKPFEFVQTAPCYNPYHPVANGVFHGFYKNPQTEALLQL
LELEYVLNKMPESREPAAGSFDYESEDIPIDDVDVDVDVDDINKVDSEDA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagcagtagaagggtgtatgcacggagacttggataatgtctatgccacccta
ttgcagttgcaagaagttgagaatataaagattgatctccttttgtgttgtggtgacttt
caggctgttaggaatgagaaggatctggaaagcttaaatgtgccacttaaataccggagc
atgaactctttctggaagtattactcaggagagaaagtagcaccatttccaactatattt
attggaggaaaccatgaagcatccaattacctttgggaattgtactatggaggatgggca
gcacctcagatatacttccttggatttgctggagtaatcaagtttggcaatgttcgtatt
ggtggcctttccggaatttataaatcacacgattacaatcgggggcactatgagaagctg
ccttataatcaacgggatattcgatctatatatcatgttcgcgagtatgatgttcacaag
ctcttgcaagttgaggaaccaattgatatctttctttcacatgactggcctgttggcatc
actgactgtgggaacttgaaagctcttcttcgtcagaagcctttctttgagcaagagatt
caggaaggaactctgggaagcagacctgctgcagaattactggcaaagttgacgccttct
tactggttttctgcacatctgcactgcaaatttgctgctttagttcagcatgagaaggat
ggtccttccacaaagtttcttgccctcgacaagtgcctccctggtagaaagtttttacag
gttattgaaattgagtccggaccaggacctcatgaacttcaatttgatgaagaatggttg
gcaatcacaagaaagtataatgctgtcttgcccttgacaatcaggagtgcaaactatagt
gatgtacatcttgacacagaagaatgccaccagtttgtaagaaataagctgcagacaaga
ggatccaaaccgtttgaatttgttcagactgcaccatgctacaatccttatcaccctgtt
gctaatggtgtcttccacggtttctataaaaaccctcagacagaagctctattacagctt
ctagaactcgagtatgttcttaataaaatgccagaatcaagggagcctgctgcaggttcc
tttgattacgagagtgaagatatacccatagatgatgtggatgtggatgtggatgtggat
gatatcaacaaagtggactcggaagatgcttaa
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