Nicotiana tomentosiformis: 104106820
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Entry
104106820 CDS
T05025
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104106820
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nto01001
]
104106820
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104106820
Enzymes [BR:
nto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104106820
Protein kinases [BR:
nto01001
]
Serine/threonine kinases: Other
VPS15 family
104106820
Membrane trafficking [BR:
nto04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104106820
Autophagy
Autophagosome formation proteins
PI3K complex
104106820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
VPS15-like_hel
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
HEAT
WDR55
PK_Tyr_Ser-Thr
EIF3I
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
HEAT_EZ
PEP5_VPS11_N
Cohesin_HEAT
TCAD9
APH
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
104106820
NCBI-ProteinID:
XP_009613747
LinkDB
All DBs
Position
8:complement(111355747..111366289)
Genome browser
AA seq
1552 aa
AA seq
DB search
MGNKIAKTTQASAMEYYLHDLPSSYNLVLKEVLGRGRFLKSILCKHDEGLVLVKVYFKRG
DFIDLRDYEQRLSKICDIFTSLDHPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LCVVEKKWLAFQLLYAVKQSHEHGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEMHVAPDAPLKPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQLLEKIPDSGIRKMILHMIQLDPESRCSAESYLQNYAGVVFP
SYFSPFLHNFYSLLNPLNSDARVLICQTSFQEIRKQMMNDKPGEGNSPAASPHSFPASQT
LQESGVNENLNLVRDSSNKREEMEKGSVHDRFDLLGNMNTVLRDAKQNNQCPAVKPVLED
IANTSYSQNQRQCHMLSPGEQISVSSNSFKRSHHPFLKKITMEDLTSLMSDYDNQSDTFG
MPFLPFPEDVMSCEGMVLIASLLCSCIRNVKLPFMRRGAVLLLNSCSMYIDDEDRLQRVL
PYVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVR
ICYASNISKLALTAYGFLIHSISLSEAGVLNEINSCQNSSISTSDRPVRPQSLNSDTQLA
QLRKSVAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQRQSSDFLLPILPAFLNDRDE
QLRAVFYGQIICVCFFVGQRSVEEYLLPYIEQALTDTTEAVIVNALDCLAILCKSGFLRK
RVLLEMIDRSFHLLCYPSQWVRRSAVTFIAASSESLGAVDSYVFLVPVIRPFLRRQPASL
ASEKALLSCLKPPVSKELYYQLVENAKSSDMLERQRKIWYNSPPQLKQWETVDLLERSSS
ELDRMKYWSGRKHDFPGYKSAGDLTKPIDFTESDDNETKVKAVGSLIQNPSGIMDSCDRL
PSEKLQLSGFVSPQVGGMSSFIDKSSEGIPLYYFKEDNKKLAGTGAAASDSSLPFTSLGF
GSSSLPWMDPVNKSFNLANSVPAPKLVSGSISIGNSSTLLRRVVHEVEDREADQTAYVNN
KFQDVGSATTKAGTLTMEDNAAATDRTDLSSFAKTSMITDSGWRPRGVLVAHLQEHRSAV
NDISISADHSFFVSASDDSTVKVWDSKRLEKDISFRSRLTYSLEGSRALCVTVLQGSAQV
VVGACDGTIHMFSVDYISRGLGNVVEKYSGIADVKKNEVGEGAIASLLNYCSDGGASKMI
LYSTQNCGLHLLDTRTGSHAWNTKVYPKEGYISSLVAGPCGNWFVSGSSRGVLTLWDLRF
CIPVNTWQYSLACPIERMSLFLPPPSTSLSAAARPLVYVAAGCNEVSLWNAENGSCHQVL
RVANNESEAENSELPWALAKPSNKANPKQDLRRNNGSKYRVDELSDPPPRLTGIRALLPL
PGGDLLTGGTDLKIRRWDHCSPERSYCVCGPSIKGVVNDDFYETKSSFGVQIVQEAKRRP
LATRLTAKAILGAAAIDSAGCHRDCILSLASVKLNQRLLISGSRDGAVKVWK
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatagcgaaaacgacacaagcgtcggcgatggagtactacctccacgac
ttgccgtcgtcatacaatctggtgcttaaagaagttctaggtcgaggtcgctttttgaaa
tcaattttgtgtaaacacgacgaaggactcgtgctcgtaaaggtctatttcaaaagaggc
gatttcattgatttgcgagattatgagcagcgtctctccaaaatctgtgacatcttcacc
tcccttgatcatccacatgtttggcctttccagttctggcttgaaacagataaagctgct
tatttgttgaggcaatacttctttaacaatctgcacgatcgtcttagtacccgacctttt
ctctgtgttgtcgaaaaaaagtggcttgctttccagttgctttatgcagtgaagcagagt
catgaacatggagtatgtcatggtgatatcaagtgtgagaatgtgctggtcacttcttgg
aactggctttatcttgcagactttgcatcgttcaaacccacttatattccacatgatgat
ccttctgatttctcattcttttttgataccggtggacgaaggcgatgctatcttgcaccc
gagagattttatgagcatggaggtgagatgcacgtagcaccagatgctcctttgaagcca
tcgatggacatctttgctgttgggtgtgttattgctgagcttttcctcgagggccagccg
ttgtttgaattatctcaactacttgcttatcgcagaggacaatatgatcccagtcaactt
ctggaaaagattccagattcaggaattcggaagatgattcttcatatgattcaattggac
ccagagtcacggtgttctgctgaaagctacttgcagaactatgcaggagttgtgttcccg
agctacttctcaccattccttcataacttctattccttattgaacccccttaactccgat
gcaagggttctaatatgccagacctcttttcaagagatccgtaaacaaatgatgaatgat
aagcctggtgaggggaactctcctgctgctagtccacattcatttcctgccagtcaaacg
ctgcaagagagtggcgtgaacgaaaatctgaacttagtgcgggactcctcgaataaaaga
gaggagatggagaagggctcagttcatgatcgctttgatcttcttggcaacatgaacacc
gtgcttagggatgcgaaacaaaataatcaatgtcctgctgtgaagccagtgctggaggat
atagccaatacttcatattctcagaaccaaagacaatgtcacatgctatctccaggtgaa
caaatctccgtcagctccaattcttttaagagaagtcaccatcccttcttaaaaaagatc
accatggaagatttgacttctttgatgtctgactatgataatcagtcagacacttttggt
atgcctttcttaccatttcctgaagatgtaatgagctgtgaaggaatggtgctgatagcc
tcactgttgtgttcctgcatacgcaatgtcaaattgccttttatgaggagaggtgctgta
ttactgttgaactcttgttccatgtacattgatgatgaagatcgcttgcagcgagtactt
ccatatgtgatagcaatgctgtcggatccagcagcaattgttcgttgtgctgccttagag
actttatgtgatattcttcctttagttagagattttcctccaagtgatgccaaaattttt
ccagagtatattctccctatgctttccatgcttcctgatgacccagaggagagtgttagg
atttgttatgccagcaatatatcaaagcttgcactaactgcttatggttttctgattcac
tcaataagcttgagtgaggcaggtgttctaaatgaaataaattcatgccagaattcatca
atatcgacctctgaccgaccagtacggccacagagtctaaacagtgatacacaacttgct
caattaaggaagtcagttgctgaggttattcaagaactcgtgatgggcccaaagcaaact
ccaaacatcaggagagcactattgcaagatattggtaacctttgttggttttttggacag
aggcaaagtagtgacttcctgttgcccattctccctgcttttctaaatgatagagatgag
cagctcagggcagtattttatgggcaaatcatatgcgtctgcttttttgttggacaacga
agtgtggaagaatatcttttaccatacattgagcaggcattgactgatacaactgaggct
gtaatcgtcaatgcactagattgcttggccattctctgcaaaagtggctttctgcgcaag
agggtcctgcttgaaatgatagaccgttctttccatttgttgtgctaccctagccaatgg
gtaaggaggtcagctgtcacctttattgctgccagcagtgagagcttaggagcagttgat
tcttatgtttttcttgtcccagtaataagacccttccttcgcaggcagccagcatcttta
gcttcagagaaagctcttctctcgtgcttgaagccaccagtttcaaaagagctatactat
cagcttgtggaaaatgcaaagagttcagatatgctggagagacagagaaagatatggtac
aattcacctcctcagttgaaacaatgggaaactgtagatttacttgagagaagtagcagc
gagttggatcgaatgaagtactggtctggcagaaaacatgattttcctggttataaatca
gctggtgatttaacaaaaccaattgattttactgaaagtgatgataatgagaccaaggtg
aaagctgtgggaagcttaatacaaaatccttctggcataatggatagctgtgatcgcctc
ccttcagaaaaattacagctatctggatttgtgtctccacaagtcggtggtatgagcagc
tttattgataaatcatctgaaggcattcctttgtactattttaaggaggataacaagaaa
ttagcaggcactggtgcagcagcttctgattcctcattgccatttacttcccttggattt
ggttcttcatctttaccttggatggatcctgtaaacaagtcatttaatttagcaaattca
gttccagcacccaagctcgtgtcaggttcgataagcattggcaatagttccacactgttg
cggagagttgtacatgaagtggaagacagggaagctgatcaaacagcttatgtgaataac
aagtttcaggatgttgggtctgctacaactaaagcgggtaccctaacaatggaagacaac
gcagctgcaacagatagaactgatttgtcctcttttgccaaaacatctatgattactgat
tcaggatggaggcctcgtggggttttggttgctcacctccaagagcaccgttctgctgtt
aatgatatatccatctcagcagaccacagtttttttgttagtgcatctgacgattctact
gttaaggtttgggattctaaaaggttggagaaggatatttcattcaggtcaaggttaact
tattctttagaaggaagccgagctttatgtgttacagtgctccaaggttctgctcaagtt
gttgttggagcatgtgatggaacaatacatatgttctctgttgattatatctctcgtgga
cttggtaatgttgtcgaaaagtattctggtattgctgatgtgaaaaagaatgaagtggga
gagggtgccatagcaagcctcttgaactactgttcagatggtggtgcctcaaaaatgatt
ttgtacagcacccagaattgtggtctccatctgttggacacaagaacaggctcacatgcc
tggaacaccaaagtttatccgaaagagggctatatatcatctctagttgccgggccttgt
ggaaactggtttgtatcaggttcctcaaggggtgtacttacactttgggatttgaggttc
tgcataccagttaacacgtggcaatattctcttgcctgcccaattgagagaatgtctctc
tttcttcctcctcctagtacgtcattgtctgcagcagcaaggccccttgtttatgttgct
gcaggttgtaatgaagtctctctctggaatgcagagaatgggagctgccaccaggtattg
agggtagcaaataatgagagtgaggctgagaactctgaattaccttgggctctggcgaag
ccatcaaataaggctaatcctaaacaagatctaagaagaaataatggttcaaagtaccga
gttgatgaattgagtgatccgcctcctcgccttactggcatccgtgcattgcttccatta
cctggtggtgatttgttaaccgggggtactgacctaaaaatacgtcgttgggaccattgc
agcccagaacgaagttactgtgtttgcggaccatctataaagggggtagttaatgatgac
ttttatgagacaaaatctagctttggcgtacaaatagtgcaggaggcgaagagacgacct
ttggccaccagactaacggcaaaggcaatccttggagctgctgctattgattctgcgggg
tgccaccgtgattgtattctctctttggcttctgtcaaattaaatcagagacttctgata
tcaggcagtagagacggagctgttaaggtttggaagtaa
DBGET
integrated database retrieval system
