Nicotiana tomentosiformis: 104106851
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Entry
104106851 CDS
T05025
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104106851
Enzymes [BR:
nto01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
104106851
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104106851
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
TRM5-TYW2_MTfase
RsmF-B_ferredox
Methyltransf_31
FtsJ
CCSAP
Motif
Other DBs
NCBI-GeneID:
104106851
NCBI-ProteinID:
XP_009613790
LinkDB
All DBs
Position
6:complement(143276473..143283021)
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AA seq
545 aa
AA seq
DB search
MSSDLDDPFAADILASSDADDGSADSDVDSDSDSDADDTDPVRKSKAIDEETERVKEDAE
AELQLNIKEEADEFRLPTTEELEEETHRPPDLSNLQRRVKEIVRVLSNFKTLRQEGVTRK
DYVDQLKRDLGSYYGYNDFLIEVLVEMFPPVELIELIEAFEKPRPISLRTNTLKTRRRDL
AGVLLNRGVNLDPLSKWSKVGLVVYDSQVPVGATPEYMAGHYMLQSASSFLPVTALAPQE
NERVVDMAAAPGGKTTYVAALMKNSGIIYANEMKESRLKSLTANLHRMGVTNTIVCNYDG
RELPQVLGQNTADRILLDAPCSGTGVISKDESVKTSKNAADIQNCSQLQKELILAAIDMV
DANSKSGGYVVYSTCSIMVDENEAVIDYALKKRDVKLVPCGLDFERPGFIRFRQHRFHTS
LDKTRRFYPHVHNMDGFFVAKLKKMSNSKSAAKSSVQSEETQDAETIQSSDQQNSEGDDK
HSEQKGIAKENGNNEEVAGDKMRKRDVQKHSDKKGVGQHGGVTKKWEGRKPIGGDKKEGK
EETPS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgacttggacgacccctttgctgctgatatattagcaagtagtgatgctgac
gatggttcagcagattcggatgtagattctgattctgattcagatgcagatgatactgat
cctgtaaggaagtcaaaagctattgatgaagaaacggaaagagtaaaggaggacgctgaa
gcagaattgcagctcaatattaaggaagaagctgatgagttcagactgccaacaactgag
gagcttgaagaagaaacacatagacccccggatctctctaatctccaaaggagggtaaaa
gagattgttcgagtgctttcaaattttaagacattgaggcaagagggtgtgacacggaag
gattatgttgatcaacttaaaagggacttgggttcatattatggatacaatgattttctg
attgaggtgttagtggagatgtttccccctgttgagctgattgaacttattgaagcattt
gaaaagccccgccctatttctctacggacaaacactttaaagactcgcagacgggattta
gctggtgttcttctgaacagaggtgtcaatttggacccattaagcaaatggtcaaaggtt
ggactagttgtgtacgattctcaagtaccagttggtgccactcctgagtatatggctggt
cattacatgctccaaagtgcgagctcttttctgcccgtaacggcccttgcccctcaggag
aatgagcgtgttgttgatatggctgctgctcctggaggcaaaacaacttatgttgctgca
ctgatgaaaaatagtggtattatttatgcaaatgagatgaaggagtcaagacttaaatcg
ctcactgctaatttacatcgtatgggggtaacaaacaccattgtatgtaactatgatgga
agagagctgcctcaagttttgggtcagaatactgctgataggattctgctggatgctccc
tgcagtggcactggggtaatctccaaggatgagtctgttaaaacttccaaaaatgctgct
gatatacaaaattgctcacagctgcagaaggaactgatacttgcagcaattgacatggtt
gatgccaactcaaaatcaggtggatacgtagtgtattctacctgctccattatggttgac
gagaatgaagcagttatagactatgcacttaagaagagggatgttaaacttgtgccatgt
ggacttgattttgagaggcctggatttattcgctttaggcagcaccgtttccacacatct
ttggacaagactaggcgattctatcctcatgttcacaacatggatggattctttgtagcc
aagttgaaaaagatgagcaattccaagtctgctgcaaaatcgtcggttcaatctgaagaa
acacaagatgctgaaaccattcagagcagtgaccagcagaactctgaaggggatgacaag
cattcagagcaaaaggggattgcaaaagagaatgggaataatgaagaagtggcgggtgat
aaaatgaggaagagggatgtccaaaagcattcagataagaaaggtgttggacaacacggt
ggtgtaactaaaaaatgggaaggcagaaaaccaatcggtggcgacaaaaaggagggaaaa
gaagaaaccccctcctag
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