Nicotiana tomentosiformis: 104107043
Help
Entry
104107043 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104107043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104107043
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104107043
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104107043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
104107043
NCBI-ProteinID:
XP_033514763
LinkDB
All DBs
Position
3:complement(44232527..44263184)
Genome browser
AA seq
854 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPREKAKSETRDWLNNVVGELENQIDTFEAELEGLSVKKGKQRPPRLVHLETSIVRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSTLPLDKVES
LEDLVTVGPPGLVKGVTVASAVLSVKNSLASSPAQSSVSVTSSAQQAACVQDQADETPSQ
DSSSEAVARTPPPKSSAVTASAPTTPAGSHATQGTVAALSPTSTPNAIKEDDVTSFPGRK
SSPALNETALRGVNRGSLSNQPVASITLGSGGAATGNGGLGAIPSASEVTKRNTLGSEDR
LGSSAMGQALVSPLANRMMMSQAAKATDGTGVADGANPGDATVMTGRVFSPSVGPGMQWR
PGSSFQTQNEAGQFRGRTEIAPDQREKFLQRFQQVQQQGQSNLLGIPPLSGGNLKQFSSQ
QQNPLLPQFNSQSSSVSPQLGLGVGVQASSINSVASSASLQQQPDAGHPKVEDLQQQQTL
PEDSSADSAANPGPGKNLLNEDDMKASYGLDTPMQGGVNGSIAEPSPRPRDIDLSPGQPL
QSSQPSGSLGVIGRRSVADLGTIGDNLSASTANSGGMHDQLYNLQMLESAFYKLPQPKDS
ERAKSYTPRHPAVTPPSYPQVQAPIVNNPAFWERLGADNYGTDTLFFAFYYQQNTYQQYL
AAKELKKQSWRYHRKYNTWFQRHEEPTVATDDFEQGTYVYFDFHIANDEQHGWCQRIKQE
FTFEYNYLEDELIV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagtcgaaagctacagggtgaaatcgatcgagttctgaagaaagttcaagaa
ggtgttgatgtcttcgatagcatatggaacaaggtttacgacacggataatgcgaaccag
aaagaaaaatttgaagcggatttgaaaaaggagatcaaaaagcttcagagatatagagac
caaatcaaaacatggattcaatcaagtgaaatcaaagataaaaaggtaagtgcctcgtat
gagcaagcattaatggatgctcgcaagcttattgagcgtgaaatggagcgattcaaaata
tgtgagaaagaaactaagaccaaagcattttcaaaagaaggtttgggtcaacaacctaag
acggatccaagggagaaggcaaaatcagagacaagagattggttgaataatgtggttggg
gagctcgaaaatcaaatcgacactttcgaggctgaattggaaggactctcagttaaaaaa
gggaagcaaaggcccccaagattggtacatttggaaacatccattgttcggcacaaggct
cacataatgaaattagagttgatattaagactactggataatgatgaattgagtcctgaa
caagtcaatgatgtcaaggatttccttgacgattatgtggaacgtaatcaggaggacttt
gatgaattcagtgatgttgatgagctttatagcactttaccgctagataaggtggagtct
cttgaagatctggttactgtcggtccacctggtcttgttaagggtgtcactgttgccagt
gctgttttgagtgtgaaaaattctctggcctcttcccctgctcaatcatcggtgtctgta
acatcttcagcacagcaagctgcttgtgttcaggatcaggctgatgaaacaccatcacag
gacagtagctctgaagcagttgcaaggaccccacctcctaaaagtagtgcagttactgct
tctgctcccacaacacccgctggcagtcatgcaacacagggtactgttgctgctttatct
ccaactagcacgccaaatgcgataaaagaagatgacgtgacaagcttccctggtcgaaag
tcttcccctgctcttaacgaaactgctttaaggggtgtcaatagaggttccctatctaac
caacccgtggctagtattacacttggttctggtggtgcagctactgggaatggaggtcta
ggagctattccttcagcttctgaagtcacgaagagaaataccttaggttccgaggatagg
cttggaagtagtgccatgggtcaggctttggtatcccctctggctaacagaatgatgatg
tcacaagcagctaaggctacagatggaactggtgttgctgatggggcaaatcctggtgat
gctacggttatgactggtagggttttctctccttctgttggtcctggtatgcaatggagg
cctggcagttcctttcagactcaaaatgaagcgggccaattccgtggaagaactgaaatt
gcacctgaccagagggagaagttcttgcaacgatttcagcaagtacagcagcagggtcag
agtaatcttcttggcatacctccacttagtggaggaaaccttaagcagttctcgtcccaa
caacagaatccacttctgccacagttcaattctcaaagctcctctgtctctcctcaactt
ggactgggagttggagtccaagcatctagtattaacagtgttgcctcatctgcatctttg
cagcaacagccagatgcaggccacccaaaagttgaagacttgcagcaacaacagactttg
ccagaagattcttctgcagattctgctgcaaatcctgggcccggaaaaaatcttttgaat
gaggatgatatgaaggcttcatatggactagataccccaatgcagggaggagtcaatggc
tctattgctgaaccatccccaagaccaagggatatagatttatctcctgggcaacctttg
caatccagtcagccatctggaagtcttggtgttattggtcgaagaagtgttgctgacctt
ggaacaattggtgataacctgagtgcatccactgcaaattctggaggaatgcatgaccaa
ttatacaacttgcagatgcttgaatctgctttttacaaacttcctcaacccaaagattct
gaacgtgcaaagagctatacgccgagacaccctgcagttacccctccaagctatccccaa
gtacaggctcccattgtcaacaatcctgccttctgggaaagacttggagctgataactat
ggcactgacactctgttctttgcattttactaccaacagaatacttatcagcagtatctg
gctgctaaggaattgaagaaacagtcttggaggtatcacagaaaatataacacatggttt
cagcggcatgaggagcctactgttgcgactgatgactttgaacaggggacatatgtgtac
tttgatttccacattgccaatgatgagcaacatggatggtgccaaaggatcaagcaggag
ttcacatttgagtacaattatcttgaagatgagctcattgtataa
DBGET
integrated database retrieval system
