Nicotiana tomentosiformis: 104107545
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Entry
104107545 CDS
T05025
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104107545
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104107545
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
WSS_VP
Motif
Other DBs
NCBI-GeneID:
104107545
NCBI-ProteinID:
XP_009614672
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Position
5:124366998..124374029
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AA seq
493 aa
AA seq
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MLSAICILLFCFLISFFPLITTSLNLTLPYQHPYPEAVVQELQRRVNESISRRQLLDTTI
NAQCQTGNPIDDCWRCDPNWASNRQRLADCAIGFGQGAIGGRNGKIYIVTDSSDRDTANP
TPGTLRHAVIQDEPLWIIFSADMFIKLKHELIVNSYKTIDGRGTKVHITGNGCITLQYIS
NVIIHNVHIYNCRPSGNTNIRSTPTHVGHRGRSDGDGISIFGSRNIWIDHCALSHCTDGL
IDAIMGSTAITISNNYFTHHDEVMLLGHDDRYLPDSGMQVTIAFNHFGVGLVQRMPRCRR
GYIHVVNNDFTEWQMYAIGGSANPTINSQGNRYMAPVDPNAKEVTKRVETDEGEWSDWNW
RSDGDVMVNGAFFVPSGEGLSNQYAKASSVEPKSAVLIDQLTLNAGVFGAPRDNSISISY
GGGTTTGASGSGGVGSTGGSDSDFFGMIFGSGAAEKLSPSTITTILLSHLIILVLYITTN
HGGQLSLQLLHLL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgctatttgtattctcttattctgtttcttaatctcatttttcccactaatt
acaacttcccttaatctcaccctcccctatcaacacccttaccctgaagctgtggttcaa
gaattacaaaggagggtgaatgagtccatatcaagaagacaactgttagacacaaccata
aatgcacaatgtcaaacagggaacccaatagacgattgctggcgctgcgacccaaactgg
gccagcaatcgtcaacgtttagcagattgcgccataggcttcggtcaaggcgcaatcgga
ggaagaaatggcaagatttatattgttactgattcctccgacagagacactgccaaccca
acgccggggactctccggcacgcggtaatccaagacgaacctctctggataattttctcg
gccgacatgttcataaaattaaaacatgaacttatcgtaaatagttacaaaacaatcgac
ggtcgtggtacaaaagtacacattactggcaatggatgtataacgttacagtatattagt
aatgttattatacacaatgtgcatatttacaattgtcgcccttcgggaaatactaatata
cgttcgaccccgactcatgttgggcatagaggtagatcggacggtgatggaatttctata
tttggttcgcggaatatttggattgatcattgtgcattgtcgcattgtaccgatggctta
attgatgctatcatggggtccactgcgattactatatctaacaactatttcactcaccat
gatgaagttatgctcttgggacatgatgatagatatttgcccgactccggaatgcaggtg
acaatagcgttcaatcattttggagtaggattagtacaaagaatgccaaggtgtagaaga
gggtatatccatgtagtgaacaatgattttacagaatggcaaatgtatgcaattggagga
agtgctaatcctactattaatagtcagggcaatcgctatatggcgccagttgatccaaat
gcaaaggaggtgacaaagcgcgtggaaacagacgagggggagtggagtgactggaactgg
agaagtgacggggacgtaatggtaaatggagcatttttcgtgccatcaggtgaagggctg
agcaaccaatacgcgaaggcctcgagcgtggagcccaaatccgctgttcttattgatcaa
ctcaccctcaacgccggtgtttttggtgccccgagggataatagtattagcatatcatac
ggaggagggaccaccaccggagctagcgggagcggcggtgtcgggtccaccggcggcagc
gatagtgatttctttggaatgatatttgggagcggcgcagcagaaaaattatcaccatct
acaatcactactattctattgtctcatttaattattttagttttgtacattaccaccaac
catggtgggcaattatcattacaattattacacttactatag
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