Nicotiana tomentosiformis: 104107725
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Entry
104107725 CDS
T05025
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104107725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104107725
03036 Chromosome and associated proteins [BR:
nto03036
]
104107725
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104107725
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104107725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
SUKH-4
Motif
Other DBs
NCBI-GeneID:
104107725
NCBI-ProteinID:
XP_009614898
LinkDB
All DBs
Position
3:complement(132056535..132062189)
Genome browser
AA seq
1037 aa
AA seq
DB search
MEVDLGTHDQLIVSQSQCKRRKVSLDGVALDQIFGENEAALPTLRSTDYFTEPCLSELAI
RELMSPGYCSSVQDFTVGRFGYGFVKFFGETDVRGLDLDRIVTFSRHEVVVYEDENDKPP
VGEGLNKPAEVTLLLKIRSSKNCDVDSSREMVEKLRCRTERQGARFISFNPSNGEWKFSV
RHFSRFGLMDDDEEDMIMDDVSPEVLDPVDMNGGDVSYIDEETTLVNTTDLSHSLPAHLG
LDPMKMKEMRMLMFPAEEEDVDDYHCVPSDRKPQFSKESSKSPFQHKYPRISPPLTRKTP
LALTEYKHGSFGSDSPGSILLTQQNKGVLLKTTKAEGLKLDLRQQTPISGSHSHNVVDAG
LFMRRSFGVGWGPNGVLIHSGAPVGSKDNQSLSSIINLEKVAFDQVARDENKKFKEELVD
LCFDSPLLLHKEISHETKEFGEGPFTLKLQRVVCDRVMLSDVCRSYIGIVERQLEVPGLS
SASRVLLMHQAMIWELIKVLFSSRQLSGKSKSLKDEDEEDMIPDMRETVSDVDPEALPLI
RRAEFSYWLQESVCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACL
LSQAGGSMVNRSDVVRQLDLWRVNGLDFNFVETERIRVLELVAGNIHRALHDVDIDWKRF
LGLLMWYQLPPETELPVLFRAYQRLLNEGKAPSPVPVYIDEGPVEVSMNWHAVKHFDLGY
YLMLLHANQEIDFSALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGAFSSNDLHLLDISF
ISQLLCLGQCHWAVYVALHMPHREDCPYLQAALIREILFQYCETWSSQDLQRQFIEDLGI
PSAWLNEALATYFNYYSEFPKALEHFLECGKWQKAHTIFITSVAHSLFLSEEHSEIWRLA
ASMEDHKSEIEDWDLGAGIYVTFYLLRSSFQEDHDAMNQEGSLENKNSDCTDFISRLNNS
LAVWTSRLPVEARVVYSKMAEEICNLLLSDSGGSSENEVQLSCYDTIFKAPIPEVTRAYH
LQDAVSLFTSYLSEVAS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgatttagggactcatgaccaacttattgtttctcaatctcaatgtaaaaga
agaaaagtatcccttgacggcgtagctttagatcagattttcggcgagaatgaagctgct
ttacctaccttgcgatctactgattattttactgagccttgcttgagtgaattggctatt
agggagcttatgagcccagggtattgcagcagtgttcaagattttactgttgggaggttt
ggatatgggtttgtcaagttttttggggaaacagatgttagagggttggatttggatcga
attgtgacgtttagcaggcacgaggtggttgtatatgaagatgaaaatgacaagccccca
gttggcgagggacttaacaagcctgctgaagtaactttgctactgaaaatacgatcctcc
aaaaattgtgatgtggattcttctagagaaatggtggagaagttgagatgtagaactgag
aggcaaggagcacgttttatctcgtttaatccatcaaatggagaatggaaattctccgtt
cggcatttcagcagatttggtttgatggatgatgatgaagaagatatgataatggatgat
gtgtctccagaagttctagacccggtggatatgaatggaggagacgtttcctacattgat
gaagaaaccaccttagtcaatacaactgatctttcacattctcttcctgctcatcttggg
ttagatcctatgaagatgaaagaaatgagaatgctgatgtttccggcagaagaggaggat
gtagatgattatcattgcgtgccttctgatagaaaaccacaattcagcaaagaatcttca
aaatcccctttccagcataaatacccgagaattagtccacctttgactcgcaagactcca
ttggctttgaccgaatacaaacatggtagttttggctcggactcaccagggtccattttg
ctgacccaacaaaataagggtgtgcttctaaagacaacaaaggctgaaggtttgaagctg
gatctcaggcagcaaacacctataagtggaagccactctcataatgttgttgatgcagga
ttgttcatgcgtagatcatttggagttggctgggggcctaatggtgttcttatccattct
ggcgcgccagttggtagtaaagacaatcaaagtttgtcctccataatcaatttggagaag
gttgcatttgaccaagtagctagagatgaaaataaaaagtttaaggaggaacttgttgat
ttgtgttttgattcacctctccttcttcacaaggaaattagtcatgaaaccaaagagttt
ggggagggacccttcacgttaaagctacaaagagttgtgtgtgatcgtgtaatgctttca
gatgtatgtcggagttatattggtattgttgagaggcagttggaggttcctggattatct
tcagcatcccgtgttcttctgatgcaccaagcaatgatttgggaattaataaaagtgctt
ttttcatccagacaattgagtgggaaatcaaagtctctaaaagatgaggatgaggaagac
atgatacctgatatgagagaaactgtttcagatgttgatccagaagcacttccattgata
aggagagcagaattcagctattggttgcaagagagtgtttgtcatagggtgcaggaggaa
gtaagctctttgaacgattcaagcgatctacaacatatgttcttacttctaactggtcgg
cagctggatgctgctgtggaactggctgcctctagaggagatgtgcgacttgcatgtctt
cttagccaagctggtggttcgatggttaatcgttctgatgttgttaggcagcttgatctt
tggagagtaaatggattggatttcaattttgttgagacagagaggattagggttcttgag
ttggttgctggcaacattcatagagctctgcatgatgtagacattgactggaaaaggttt
ctggggttgttgatgtggtatcagcttccaccagaaactgaattgcctgttttattccgc
gcatatcagcggcttctcaatgaaggaaaagctccatctcctgttccagtttatattgat
gaaggacctgtagaagtgtctatgaattggcatgcagtgaaacattttgaccttggctat
tatcttatgcttcttcatgccaatcaagaaattgatttcagtgctctaaagacgatgttc
agtgcctttgcttcaacaaatgatccccttgactaccacatgatctggcatcaacgagct
gttttagaagccattggtgctttcagttctaatgatcttcatctcctagacattagtttc
atttctcagctgctgtgtcttggtcaatgtcattgggctgtctatgtggcgcttcacatg
cctcaccgtgaagattgtccttatttgcaagctgctcttataagggaaatactctttcag
tattgtgaaacttggagttctcaggacttacagcgacagtttattgaggatctaggtatt
ccatcagcatggttgaacgaagctttggcaacatattttaattactactctgaattcccc
aaagccctagaacactttttggaatgcggaaagtggcagaaagcgcacaccatttttata
acttcagttgctcattctcttttcctatcagaagaacactctgaaatatggaggctagca
gcttccatggaggaccacaagtcagaaattgaagattgggatctgggagctggaatatat
gtaactttttatttgttgagaagttcttttcaggaggaccatgacgctatgaaccaagag
ggctctctagaaaacaaaaacagtgattgtacagacttcatcagtcgcttaaacaactct
ttggctgtttggactagcagattgcctgtcgaagcaagggtggtttattcgaagatggct
gaggagatatgcaatttgctgctttctgatagcggtggaagttcagaaaatgaggtccag
ctaagctgctatgataccatattcaaggcacccatacctgaagttacccgtgcataccat
ttgcaggatgctgtgtctctttttacatcttacctttcggaggtggcatcatag
DBGET
integrated database retrieval system
