Nicotiana tomentosiformis: 104108071
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Entry
104108071 CDS
T05025
Name
(RefSeq) polygalacturonase-like isoform X2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Module
nto_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104108071
Enzymes [BR:
nto01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104108071
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
104108071
NCBI-ProteinID:
XP_009615338
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Position
12:complement(127280398..127284878)
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AA seq
383 aa
AA seq
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MHPQNHCRPNNRRSGHVTPKLDGLHCLDGQTDSTRALLTAWAAACGSLKPATIFVPQGKY
LVKQAHFKGKCKNRAIAFKIDGTLIAPSDYNVIGNSKNWIMFQGVDGVSIHGGILDGQGT
TLWSCKASGKNCPSGATTLGFSNSNNIAITGLTSLNSQMFHIVFNGCKNVKLQAVRVFAS
GKSPNTDGIHVQLSSDISILNSKISTGDDCISIGPGTTNLWIQNMACGPGHGVSIGSLGK
DFQEAGVQNVTVRSVIFRNTQNGVRIKTWGRPSTGFVKNVLFQHATMINVQNPIVIDQNY
CPYNKNCPGQVSGVTISDVTYQDIHGSSATRVAMKFDCSKRNPCRGITLEDVHLTYKNQP
AAQASCANAAGTTSGIIQPTSCL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcatccacaaaatcattgtcgccccaataacagaagatcaggccatgtcacgcccaaa
ttggacggcctccactgtttggatggacaaactgactcaacaagggctttgttaactgct
tgggcagcagcttgtggctctttaaaaccagccactatatttgtcccacaaggaaagtat
ttggttaaacaagcacattttaaaggaaaatgcaagaatagagccatagcattcaaaatt
gatggcacacttattgcaccctctgattataatgtgattggaaattccaaaaattggatt
atgtttcaaggtgttgatggagtttctattcatggtgggattcttgatggccaagggact
actttgtggagttgcaaagcctccggcaagaactgcccgagcggtgctactactctggga
ttttctaactcaaacaatatagcaataacaggactaacttcattgaacagccaaatgttt
cacattgtcttcaatgggtgcaaaaatgtgaagttgcaggctgtcagagtttttgcctct
ggcaaaagcccgaatactgatggtattcacgttcaattatcgtctgacatctcgatcttg
aactcgaaaatcagtaccggagatgattgcatctccattggccctggaactactaacttg
tggatccaaaacatggcttgtggccctggccatggagtcagcattgggagtttaggcaag
gattttcaagaagcaggggtgcaaaatgtgacagtcagatcagttatatttaggaacaca
caaaatggtgttaggatcaaaacatggggcagaccaagtactggctttgtaaagaatgtt
cttttccaacatgctacaatgataaacgttcaaaacccaattgttattgatcagaattac
tgcccatacaacaaaaattgtcctggccaggtgtcaggtgtgacgattagtgatgttaca
tatcaagatatacatggaagttcagcaacacgagtcgctatgaaatttgattgcagtaaa
agaaatccatgccgaggaataacattagaagatgttcatctcacttataagaatcaacca
gctgctcaagcttcttgtgctaatgctgcaggaacaacttctggcataattcagccaact
agttgtttataa
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