Nicotiana tomentosiformis: 104108263
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Entry
104108263 CDS
T05025
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104108263
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104108263
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104108263
NCBI-ProteinID:
XP_009615547
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Position
3:115978231..115980658
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AA seq
434 aa
AA seq
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MEFTKNNLFLFVMFVLVLSIEAHIGEFDEVWRKRAQQAKKAARHAYHPNPKIVADHLNNQ
VDKAVRGSNSRRRDLHRYNGQCKATNPIDQCWRCDPNWARNRMKLADCVLGFGRKTTGGK
GGKSYVVTDNSDNDLVNPKPGTLRHAVIQPQPLWIIFAKNMVIRLNEELIMTSNKTIDAR
GKQVHIAHGGGLMLQFIHNVIISNLRIHDTKAGNGGLIRDSVNHYGYRTKSDGDGISIFG
STNVWIDHVSMSNCQDGLIDAVEASTAITISNCHFTKHNEVMLFGASDSSSRDSIMQITL
AFNHFGQGLRQRMPRVRWGFVHAVNNDYTHWLMYAIGGSMHPTILSQGNRFIAPPNPNAK
EVTKRDYAPESVWKNWVWKSQGDLMMNGAFFVESGNPNHAFLRSPDMISSKPGSFVSSLT
RFSGSLNCIEGKPC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaattcacaaagaataatttgtttttgtttgttatgtttgttctagttcttagcata
gaggcacacattggggagtttgatgaggtgtggcggaagcgagcccagcaagcaaagaag
gccgctcgccatgcctatcatcctaatcctaagattgtagccgatcatcttaacaaccaa
gttgacaaggccgtacgaggcagcaatagcagaagaagggacctgcacaggtacaatggt
caatgcaaggcgacgaacccaattgaccagtgctggcgatgcgatccaaattgggctcga
aaccgaatgaaactagcagattgcgtccttggttttggccgcaagacaaccggaggcaaa
ggtggaaaaagctacgtagtaactgacaattcggacaacgatttagttaatcccaagcca
ggaactttacgccacgccgtgatccagccgcagccactttggattatatttgccaagaac
atggtaattaggttaaacgaggagctaatcatgaccagcaacaagacaattgacgcccga
ggaaagcaagtgcacattgctcatggtggtggccttatgttacagttcatacacaatgtc
ataattagtaaccttcgaattcatgatactaaggctggtaatggtggcctaattagagac
tccgtcaatcattatggttatcgaacgaaaagtgatggtgatggtatttcaatctttgga
tccacaaatgtttggattgaccacgtctccatgtccaattgtcaagatggtctcattgat
gctgttgaggcttcgacagccattaccatttccaactgccatttcactaaacataatgaa
gtcatgttgtttggagccagtgatagttcctcaagggactctattatgcaaatcacactt
gctttcaatcactttggacaagggttgaggcaaaggatgccaagagtgagatggggattt
gttcatgctgtcaacaacgattacacacactggctaatgtatgccattggaggaagcatg
catcctaccatccttagccagggaaatcgcttcatcgctccccctaatccaaacgccaaa
gaggtgaccaaaagggattatgcacctgagagcgtgtggaagaactgggtatggaaatca
cagggagatcttatgatgaacggggcgttctttgtagaatctggaaatccaaatcatgca
ttcttgaggagtcctgatatgatcagctccaagccaggatcatttgtgagcagcctgaca
cgattttcaggctctctaaactgcattgaggggaagccttgttaa
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