Nicotiana tomentosiformis: 104108357
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Entry
104108357 CDS
T05025
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nto03110
]
104108357
Chaperones and folding catalysts [BR:
nto03110
]
Heat shock proteins
HSP100
104108357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
AAA_14
AAA_18
AAA_28
NACHT
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
104108357
NCBI-ProteinID:
XP_009615664
LinkDB
All DBs
Position
3:135337570..135344327
Genome browser
AA seq
923 aa
AA seq
DB search
MARALVQSTNIPSSVAGERTRQFSGSGKNKKTVKMLCNVQSPSIRLTNFTGLRGCNAIDT
LVKSGQTLHSKVAAATSVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESNEAVG
ASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALEAAAQLSYQYISDRFLP
DKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD
LKAQISALIDKNKEMSKAESEAGDTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKM
EETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKNKEI
ELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSD
GNVTVLNGTSGTPSDPAPEPIPV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctagagctttagttcagtcaaccaacatcccatcttcagttgccggtgaaaggact
aggcaatttagtggatctgggaaaaacaaaaaaactgttaaaatgctatgtaatgtacaa
tcaccctccataaggttgaccaattttacaggactgcgagggtgcaatgcaatagataca
cttgtaaaatctggacaaactctccattcaaaagtggcagctgcaacttctgtcagacgg
ccaagaggttgccggtttgtcccaaaagcaatgtttgagcgcttcactgagaaagcaata
aaagtcattatgcttgcacaagaagaggcgagacgactaggtcataacttcgttggcaca
gagcagattttgttgggtcttattggtgagggaactggtattgcagctaaagttcttaaa
tccatgggaatcaatttaaaagatgcccgtgtggaggtggagaagataattggaaggggt
agtgggtttgttgctgttgagattccatttactcctcgtgcaaagcgtgttcttgaactc
tctctggaggaagcccgccaactagggcataactacattggctcggaacacttgctgctt
ggactgctgcgtgaaggtgaaggtgtggctgcccgtgttcttgagaacttgggtgctgac
cccagtaacattcgcacacaggtcattcgaatggttggcgagagtaatgaggctgttggt
gctagtgttggtggtggaacttctggacaaaagatgcctacattggaggagtacggcacc
aatttgacaaagttggctgaagaggggaaactggatcctgttgttggaagacagccgcaa
attgagcgcgttactcaaatcttgggtcggcgtacaaaaaacaacccttgccttattgga
gaaccaggtgttggcaaaactgctattgctgaaggtttagctcaaagaattgctaatggc
gatgtccccgaaacaatagagggaaagaaggtcataacactagatatgggtttgcttgtt
gctgggacaaaataccgtggagagtttgaggaaagactgaagaaactaatggaagaaatt
aaacaaagtgatgaaataatactctttattgatgaagtgcacacattgattggagctgga
gctgcagagggggcaattgatgctgcaaacatcttgaaacctgccctagctagaggggaa
ctacagtgtattggagccacaaccctggatgagtacagaaagcacattgagaaagatcct
gcattggagaggagattccaaccagttaaagtccctgaacctactgtggatgaaaccata
cagatcttgaaagggcttcgggagagatatgagattcatcacaagctccgttacaccgat
gaggcattagaagctgctgcccagctttcttatcagtacatcagtgaccgttttctgcct
gataaggcaattgatttgattgatgaagctggttcccgtgttagactacgccatgcacag
ctccctgaggaagcaagagagctcgagaaagaactccgtcagattactaaggagaaaaat
gaagctgtgcgaggtcaagattttgaaaaggcgggggagctgcgtgatagagaaatggat
cttaaggcacagatctcagccctgatagacaaaaacaaagagatgagcaaggctgaatct
gaggctggagatacaggtccgctcgttacagaggcagatattcagcacattgtgtcttca
tggactggcatccctgtcgagaaggtttcaacagatgaatctgatcgcctcttaaaaatg
gaagaaacacttcacaccagaatcattggccaggatgaagctgtgaaagccattagtcgc
gctatccgacgtgctcgtgttgggctcaagaatcccaaccgacctattgccagtttcatc
ttttctggtccaactggtgttgggaaatcagaactggccaaggctttagcagcatactac
tttggttctgaagaagcaatgatccggcttgatatgagtgagtttatggagagacacact
gtctctaaactcattggttcaccccctggttatgttggttacactgaaggtggtcaactg
actgaagctgtgaggcgtcgaccttacactgttgtgctctttgatgagattgagaaggct
catcctgatgtcttcaacatgatgcttcaaattcttgaagatggaagattgacagacagc
aagggcagaactgtcgacttcaagaatacacttctcatcatgacatcgaatgtcggaagc
agtgtgatagagaaaggaggccgtcgtataggttttgatctagattatgacgagaaggat
agcagttacaaccgtatcaagagcttggtgactgaggagttgaaacagtactttaggcca
gagttcttgaacagattggatgagatgattgtattccgtcagctcactaagttagaggtg
aaggagatagctgatatcatgcttaaggaggtctttgagaggttgaaaaataaggagata
gaacttcaagtgacggagaggtttagagacagggtggttgacgaagggtacaacccaagc
tacggagcaagaccgttgaggagagctattatgagactgctggaagacagcatggccgag
aagatgcttgcaggtgagatcaaagaaggtgattcagtaattgtggacgtggactctgat
ggtaatgtgaccgtcctcaatggcactagcggaactccctcagatccagctcctgagcct
atccctgtgtag
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