Nicotiana tomentosiformis: 104108368
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Entry
104108368 CDS
T05025
Name
(RefSeq) ubiquitin receptor RAD23b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03420
Nucleotide excision repair
nto04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104108368
09124 Replication and repair
03420 Nucleotide excision repair
104108368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nto03051
]
104108368
03400 DNA repair and recombination proteins [BR:
nto03400
]
104108368
Proteasome [BR:
nto03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104108368
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104108368
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
TECR_N
UBA_3
Ubiquitin_2
Rad60-SLD_2
UBA_RAD5A
MmeI_C
Motif
Other DBs
NCBI-GeneID:
104108368
NCBI-ProteinID:
XP_009615678
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All DBs
Position
3:complement(134357533..134360935)
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AA seq
367 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSDTIMAVKKHIEDVQGKDNYPCGQQLLIHNGKVLKDESTLV
ENKVSEDGFLVVMLSKSKTASSSGTTSAQQPSVTAANPTPAPEVTPPSQAPKNVASASDA
AAASLPTDDYSQAASNLVAGNNLEQTIQQIMDMGGGSWDKETVTRALRAAYNNPERAVDY
LYSGIPETAEVAAPVAHGGVNSAAGTTAAPTAPSSGGPNSAPLNLFPQENVAGANGAGLG
SLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRSIQEHHQEFLQLINEPVDG
SDGDIFDQAEQEIPHTVSVTPEEQAVIERLEAMGFDRALVIEAFLACDRNEELAANYLLE
HAGDYED
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcactgtaaagactctcaaaggcagtcacttcgaaattagggttcagccctcc
gataccattatggctgtcaaaaaacacattgaagatgtgcaaggaaaagataattaccca
tgtgggcagcagttgctgattcacaatggtaaagtgctgaaggatgaaagtacgttagtg
gaaaacaaagtctctgaggatggtttcctcgttgtcatgcttagcaagagcaaaactgct
agctcaagtgggacaacatctgctcagcagccatcagttactgcagctaatcctactcca
gcacctgaagtgactccgccatcacaggccccaaagaatgttgcatcagcttctgatgct
gcagcagctagtcttccaactgatgattatagtcaagctgcgtcaaatctagttgctggc
aataatcttgagcagacaatacaacaaattatggatatgggtggcggcagctgggacaaa
gagacagttacacgtgcacttcgagcagcttataacaatcctgaaagagctgttgattac
ttatattcaggaattcctgaaacagccgaagtcgctgcaccggttgctcatggtggagtt
aattctgcagctgggactactgcagcgcctactgcaccttcctctggcggacctaattct
gctcctttaaatttgtttcctcaggagaatgttgctggtgctaacggtgctggtcttgga
tcccttgattttctcaggaacaaccaacagttccaagctttacgttctatggttcaagct
aacccacaaattttacaacctatgcttcaggaactaggaaagcaaaatcctcaactttta
agatctatacaggagcatcatcaagagtttcttcaattaattaatgaacctgtagatggt
tccgacggggacatctttgatcaggctgaacaagagataccccacacagttagtgtcaca
ccagaagagcaggcggtgattgagcgactggaggcaatgggttttgatagagctcttgtc
attgaggcttttttggcttgtgatcgcaatgaggaactagccgcaaattatctgttggag
catgcaggagattacgaagattaa
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