Nicotiana tomentosiformis: 104108417
Help
Entry
104108417 CDS
T05025
Name
(RefSeq) amino acid transporter AVT1A-like isoform X1
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104108417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nto02000
]
104108417
Transporters [BR:
nto02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
104108417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
104108417
NCBI-ProteinID:
XP_009615733
LinkDB
All DBs
Position
12:66191626..66205386
Genome browser
AA seq
579 aa
AA seq
DB search
MQWLWKSRERIQSCLCRAHIYIYIYIYIYIYIYGLCKGLEITMAKKYEELSEYLSDDVEA
NPISDSLTMSDDEEEGEGDGSTADEEGQISPFSSQQWPQSFRETIDSYTIAASPSFGLLR
LGSSIISEVDSREFLDSDVKTHLLAEKEKVQEQNVVDEISVAKASWSEKASSLHEQLVGE
LPISCGCSLTQTIFNGVNVMAGVGLLSTPYTVKEAGWASLLVLVIFAVICWYTASLMRHC
FKSREGITTYPDIGEAAFGKFGRLIISIILYIELYSYCVEYIILEGDNLTTLFPGTSLNW
DGLKLDSTHFFGILTALVVLPTVWLRDLRVISYLSACGVLATIIIALCVLFLGTVDGVGF
HNTSQVLNWSGIPFAIGVYGFCFSGHSVFPNIYQSMADKSKFNDAVTICFILCILIYGGV
AIMGYLMFGQSTLSQITLNMPEDSIASRIAVWTTVINPFTKYALLMNPLGRSIEELLPPR
ISSSFLCFILLRTVLVFSTLCVAFLIPFFGLVMALIGSLLSILVRFLQSYGFEKRAGNIT
LYMSSLLAISQCVTLSLDAQFIERVSMEGRHKHGMNCNA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggttgtggaaatcacgagaacgtattcaatcatgtctttgcagagcccatata
tatatatatatatatatatatatatatatatatatatatgggctctgcaaaggattggaa
ataaccatggcaaagaagtatgaagaattatcagaatacttatcagatgacgtggaagcc
aatccaattagcgatagccttactatgagtgatgatgaagaagaaggagagggtgatggt
agtactgctgatgaggagggtcaaatatcaccattttcttctcagcaatggccccaaagt
ttcagagagacaattgactcatatacgattgccgcatcaccaagtttcggactcctacga
cttggatccagtattatatctgaagttgatagtagagagttcttggactcggatgtgaag
acacatttactcgctgaaaaggaaaaagttcaggagcaaaatgtcgtggatgaaatctca
gtagcaaaggcatcttggtcagagaaggcttcttcattgcatgagcaactggttggggaa
ttaccaatttcctgtggatgcagcttaactcagactatattcaatggtgtcaatgtcatg
gctggagttggactgctctctactccttatacagtgaaagaagctggttgggctagtttg
ttagtgttggtaatttttgcagttatatgttggtacacagcttctcttatgaggcattgc
ttcaagagcagggaaggaatcacaacctatcccgatattggagaagctgcatttggaaaa
tttggacgccttattatatctattatcttgtacattgagctatattcatattgtgtagaa
tatataattttggaaggagataaccttactactctttttcccggaacttcactaaactgg
gatggccttaaacttgattcgactcacttctttgggatcctgactgccctagttgttctg
ccaactgtttggttgagggaccttcgtgtaatatcatacctctcagcctgcggggtcctt
gcgactataataattgctctgtgtgtgcttttccttggtacggtggatggagtcggattt
cataataccagtcaggttctgaactggagtgggattccttttgctattggggtatatggc
ttttgcttctctgggcactcagtgttcccaaacatctaccaatctatggctgacaaatca
aaattcaatgacgcagtcacaatatgctttattctgtgtattctaatatatggaggtgtt
gcaataatggggtatctcatgtttggtcaaagcacattgtctcagattactttaaatatg
cctgaggattcaatcgcttcaagaatagcagtatggaccactgttatcaacccattcacg
aaatatgcattgctgatgaatcctttgggaagaagcatagaggaattgctgcccccacga
atctctagtagtttcttgtgttttattctcctaaggacagtgcttgtcttttctaccctg
tgcgttgcatttctaattcccttttttggtcttgtgatggctctgattggttctcttctc
agtatactggtgcgcttcttgcaatcttacgggtttgagaaacgagcgggaaacattact
ctatacatgtcctctctattggctatctctcaatgtgtgacattatcacttgatgctcaa
tttattgagagagtgtcaatggaaggaaggcacaagcatggtatgaattgcaatgcatga
DBGET
integrated database retrieval system
