Nicotiana tomentosiformis: 104108747
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Entry
104108747 CDS
T05025
Name
(RefSeq) BRCT domain-containing protein At4g02110 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104108747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nto03032
]
104108747
03400 DNA repair and recombination proteins [BR:
nto03400
]
104108747
DNA replication proteins [BR:
nto03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104108747
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104108747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
104108747
NCBI-ProteinID:
XP_009616157
LinkDB
All DBs
Position
1:92997409..93004354
Genome browser
AA seq
1108 aa
AA seq
DB search
MAEINQDMLHGDFSRIFIGVRFVLSGFDSLRKEQIRSKLLEGGGVDAREYGPDCTHLIVD
RIVYDDPICVAARRDGKVLVTSLWVEHSFDVGMAVDHLSMMYRPLRDLNGIPGAKSLILC
LTGYQRQDRDDIMTMVGLMGANFSKPLVSHKVTHLICYKFEGEKYELAKKLKRIKLVNHR
WLEDCLRAWEILPEAAYDKSGYELEMVEAEAKDSEDEQDGIAANTGGERVSFTSPQHSKS
PSQFCLKQEICRNISEIHTPTGLADLGNHDQLVLCASKESKVDLVTAFEESHKSHLETLG
TTLSRNKEVPHSTPLNGNSPASVSTSAKKSPNSCLSNSCIKSYSRKKPRKIGLASEQIES
AGCPPINEVSKHCDVNISSEKEQDGTELFSAEKDQSGLLPGKRRVDMLYSSSNSSRTSHN
PVSMLDRGLVEDRGIGLGRHLLLGKNVHSENGARLDPSQNCDSSISNPIKLGNQQECDED
ALQAGTCAVRGLKEITLSSNVDPVNFHLCETKDSTVELNGLRNELQAAKNPSPGNESEDI
EKSSRLAELENAVGDSTSGSKPLKRKSLSKKTLGSRQSLCKGDSRNQKGTISLNKIVPAN
ESAPSVSGGIKNTEHQEVLSCEKVEVPPADTAESNKETEKRKYFDSGNEDIKTAESINRD
AETPENKEYDELNVARAELGGAPHSGVNSTEKNPAVNQLVNRTDVEDCAVRHDSDNKSSK
AQKTISRKKTRSNKSTSVENDVDVKETKGPKYLMKRSRTTNLAAKRAVVSTEVAKRKKSK
SETKKNAELGKGKGLPVTGKATLAPDHELNSMDAEKENEPAIGGQHTTYIEQGAGETSPK
CKIKPLKADVANPDALQVTKLGTERRWFILSGHRLQRKEFEKVIKRLKGNVCRDSHQWSY
QATHFIVPDPVRRTEKFLAAAASGRWILKTDYLTASNEAGRLLDEEQYEWHKKGLTEDLA
IDLEAPRKWRLLRERTGHGAFYGMKIIIYGDCIVPPLDTLKRAVKAGDGTILATSPPYTR
FLKSGVDFAIVDETMPHYDKWIQEFLRHEIPCVLPDYLVAYVCKPGYPRDSYVKYNTHTW
VERSLKNLADRLEEVVEGIVLSDDNSNM
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatcaaccaagatatgttacacggagacttctccagaatcttcatcggtgtt
cgttttgttctttccggattcgattctctaagaaaagagcagattcggtcaaagcttttg
gagggtggtggggttgacgcgagagaatatggaccggattgcacacacctcattgtagat
agaatagtttatgatgatcccatatgtgttgctgcccgacgggatggaaaagttctagtc
acaagcttatgggttgagcacagttttgatgtgggaatggctgtcgatcatctttctatg
atgtacagacctctgagggatttgaatggaatcccaggtgctaaatcgctaattctgtgc
ttaactggatatcagcgacaagaccgagatgatattatgacaatggttgggctgatgggt
gcaaatttttcaaagccattggtttcacacaaagtcacgcatcttatttgctacaaattt
gagggagagaaatatgagcttgccaagaaactgaagaggataaagctagtgaatcaccgg
tggttagaagattgtttaagggcttgggaaattcttcctgaggctgcatatgataaaagt
gggtatgagttggagatggtggaagccgaagccaaggattctgaagatgaacaagacggc
attgctgcaaacacgggcggagagagagtttctttcactagtcctcaacattcaaagagt
cccagtcaattctgtttgaagcaggagatctgtagaaacatctcagagatacacacacct
acaggtttggcagatcttggaaaccatgatcagctggtgttatgtgcttccaaggaatcg
aaagtggacctggttacagcctttgaagaatctcacaagagccatcttgagacccttggc
accactctgagtagaaataaagaggtgccgcatagcacgccacttaatggaaatagtccg
gcttcagtttctactagtgctaaaaagtctcctaactcatgtttgtcaaacagttgtatt
aaaagttattcccgaaaaaaacctagaaaaattggtctggcctcggaacaaattgagagt
gcaggatgtcctcccattaatgaggtgagtaaacattgtgatgtgaacatctcctcagag
aaagaacaggatggaactgaattgttttctgcagaaaaggaccaaagtggtctactccct
gggaaaaggagggtggacatgttatatagtagctccaattcttcaagaactagtcataat
ccagtcagcatgttagatcgtggcctggtagaagatcgtggcatagggttaggcagacat
ttgttattagggaagaatgtccattctgaaaatggtgcaagacttgatccctcgcaaaac
tgtgattcttccatttccaatcccataaaactgggcaatcagcaagagtgtgatgaggat
gcattgcaagctggcacttgtgcagtcagggggttaaaagagattactttgagcagcaat
gtggaccctgtgaattttcacttatgtgagactaaggattctactgttgaacttaacggc
ttaaggaatgaactgcaagctgccaaaaatccatctccaggcaatgaaagtgaagatatt
gagaagtccagtcggttggctgaattggaaaatgctgtaggagattctacgtcagggtct
aagccattaaagagaaaatccctttccaagaagactctgggatctagacaaagtctctgt
aaaggggactcgagaaatcagaaaggtactatatctcttaacaagattgttcccgcgaat
gagtctgcaccctctgtgagtgggggcataaagaacacagagcaccaagaggttctcagc
tgtgaaaaggttgaggttccaccagcagatactgcagaatcaaacaaagagactgagaaa
agaaaatactttgattctggaaatgaagatattaaaacagctgaatccataaatagagat
gctgagactccagaaaacaaagagtatgatgagttgaatgtcgcaagagcagagttaggt
ggagcaccacactcaggggttaattctacggagaagaatccagctgtgaaccagttggta
aatcggactgatgtggaagattgtgctgtgaggcatgattctgacaacaaaagttctaaa
gctcaaaagactatttccaggaagaagactaggtcaaataaatcaacttctgtggagaat
gatgtagatgtgaaagaaaccaaaggtccaaagtatttgatgaagaggagcaggacaact
aatttagctgccaaaagagctgtagtttcgacagaagttgccaaaaggaagaagtccaaa
agtgagacaaagaagaatgcagaattagggaagggaaaaggtttacctgtaacaggcaaa
gccacactggcacctgatcatgaattgaactccatggatgcggagaaggagaatgaacct
gctattggaggtcaacacacaacatatattgaacaaggggctggcgaaacgtctccaaaa
tgtaaaataaagcctctaaaggctgatgttgcaaatcctgatgctttgcaggttacaaaa
ctagggactgagcggaggtggtttatccttagtgggcataggctacaaagaaaggagttt
gagaaggtcatcaaacgtttgaaaggaaatgtgtgcagagattctcatcaatggtcatat
caggcaacacatttcattgtcccggatccagttcgcagaactgaaaagtttttagctgct
gcagcctccggaaggtggatcctgaagaccgattatttaactgctagcaatgaagctgga
agactcttggatgaagaacaatatgaatggcacaaaaagggcttgacggaagatttagcc
atcgacttagaggccccaagaaagtggcggcttctgagggagagaactggtcatggtgca
ttttatggaatgaagataatcatatatggagactgcattgtaccaccactggatacacta
aaacgtgctgtcaaggccggagatggtactatattagcaacttcacctccttacactcgg
ttccttaagtcaggtgttgattttgctattgtcgatgagaccatgccccattatgataag
tggattcaagaattcctaaggcacgagataccttgcgttttgcctgattacttggtggct
tatgtgtgcaagcccggttatccccgtgacagttatgtaaaatacaatactcatacttgg
gtagaaaggtcattgaagaacctggcggatcgcttggaagaggttgttgagggcatagtg
ctatcagatgacaatagtaacatgtaa
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