KEGG   Nicotiana tomentosiformis: 104109231
Entry
104109231         CDS       T05025                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104109231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nto03041]
    104109231
Spliceosome [BR:nto03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104109231
 Complex B
    104109231
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus HATPase_c zf-CCCH_4
Other DBs
NCBI-GeneID: 104109231
NCBI-ProteinID: XP_009616753
LinkDB
Position
11:102037717..102041863
AA seq 306 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDSITP
GVDPQGHPIDPHKIQQHFEDFYEDLFEELNKYGEIESLNVCDNLADHMVGNVYVQFREEE
QAGNALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKRISREL
RQQLFGRYRRRHSRSRSRSPYRHRSYDERSRRSHSRKYDDKDHYYESRSRRNRSTSPDRR
RGRSRSPGGRRDRSPIRDGSEERRARIEQWNREKELANRGNEDSSNKNENNENGYVQNPD
QYYNQQ
NT seq 921 nt   +upstreamnt  +downstreamnt
atggcagagcacttggcttcgatcttcggcactgaaaaagacagagtgaattgcccattc
tacttcaaaatcggagcttgtagacatggcgatcgctgttcgaggcttcacactaaaccc
agtattagccctaccattctcctctctaacatgtaccaaagacctgacagtattacccct
ggcgtcgatcctcaaggccatcccattgatcctcacaaaatccagcaacactttgaggat
ttttatgaagacttgtttgaagaactgaacaagtatggagagattgagagcttgaatgtt
tgtgacaatctggctgatcacatggttggtaatgtttatgttcagtttagagaggaagag
caggctggaaatgcactgaagaatcttactggaagattctatgctggaaggcccatcatt
gttgatttctctcctgtgactgattttcgtgaagccacctgtagacagtacgaggaaaat
gtttgcaaccgcggtggatattgcaactttatgcacctcaaaaggatcagcagggaattg
agacaacagttgtttggaaggtataggagaaggcatagccgtagcagaagccgaagtcct
tataggcatcgcagctatgatgagcgctctcgcaggagtcatagtagaaagtatgatgat
aaggaccattattatgagagtcgtagcaggaggaacagaagtacaagccctgatcgtagg
aggggtaggagcaggagtcctggtggcaggagagacagaagtccaattagggatggcagt
gaagaaaggcgtgcacgaatagagcagtggaaccgggaaaaagaactggctaacaggggt
aatgaagacagtagtaacaaaaatgaaaacaacgagaatggatatgtccaaaacccagat
cagtactacaatcagcaatga

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