Nicotiana tomentosiformis: 104109424
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Entry
104109424 CDS
T05025
Name
(RefSeq) RRP12-like protein isoform X2
KO
K14794
ribosomal RNA-processing protein 12
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104109424
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
90S particles
Other 90S particles
104109424
Pre-60S particles
Other pre-60S particles
104109424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
DUF3730
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
104109424
NCBI-ProteinID:
XP_009617021
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MDPSDNNNVFNENSDICEQLLQRYTKSSAPQHRHLIATAAATRSIIQSESLPLTPFSYFA
ATISTLSNNSQNTLDPQALSALSSFLAIVLPLIKDVSSDKATEAIGVIVAILEKQPLENE
GVLGTSTVRAFVKCLGILVGFCDKEDWSSVEVGFESLVKFSIDKRPKVRKCAQDCILTVF
KSFGSSSVAKKAGKRMYSLIEDNMTLAMKLSAPKEISGSKDEHQEVLHSLNILKPIIPYL
SVKVKQKLLAQLVELMSSQSSAFTRHIFDNIGAILDASGVEIILQDADNVIKALISYISS
AENPADNVLLAATLAKSIIEKLHVGGISVWITYLPLVVDSISGLLTRPENIALQSSNILK
ELIIAHIDGKEFLTGKKQAVDDETLNSSEFAAVKAIFLVFEDLLISSSEFPNDHILAILS
VVFLKLGEVLDLCAKGLILKLADWMTVASGGAYDTKNLQVCIGAAVIAMGPEKLLALLPI
TLNAKDYSVSNTWLIPILNKYVCGSSLGFFIKHMVPLAVSFEQASSKVKKSVIREELQAY
ARGCWGLLPAFCRSPSDVHKNAQALTTLLIPFLKKESFMLENISAALQELVNKNKSALAS
DNFSEELIVPQKEDENLELALEFKRKCSYSKKPASKNIKALASCSEEWLQALVNVFFKSS
PANYQQFKEAIECLTSISDSSTTQRIFTSSMERSGITNGSGEYRKLGFHSDGSTDNEENN
TTLLGEVAKRCLILELGSCFVEGASEDLIKIFFGIAKDVLEATHGAGHLEAYHILNRILE
KSSWFRSSHVEQLMDLLASVKPPTDVKSLKSRFACYKTLLIDSIQGNLDEENTQAFLILN
EIILALKDSTEEGRKTAYDVLIGVCSSLRDSSSAKSNESYKKFIDMIIAYLSGSSPHIKS
GAVSALSVLVYSDADICVSVPDLVPSVLTLLQSKDVEVTKAVLGFVKVMVSSIQAKDLHI
LLSDIVNGVLLWSSVSRHHFRSKVTVIMEILMRKCGVAAVKSIAAEKYKNFIKTVAENRH
GKTSSREDGTPETESIPSDSRQRKRKDRESSDSLKEKDSREPYKRKKREEDEKDSSTKFS
KEGVMGGGKRKREMKRKNNTADEPYFSSGSSGGKNLVKRKREFNHRKQEGDKAPLQKRGE
GGKFKRDFPGKGKTERQKRPANDVRGSGVAHKRGQNRRQKTNKNS
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcagacaacaacaatgtcttcaacgaaaactccgacatctgcgaacaactc
ctccaacgttacactaaatcctccgccccacaacaccgccacctcatcgccaccgccgcc
gccacccgttccattatacaatctgaatccttacccttaacgccattttcttacttcgca
gccacaatctccacactttctaataattcccaaaataccctcgacccacaagccttatct
gcattatcatcattcttagctattgttcttcctttaattaaggatgtttcttcagataaa
gctactgaggctattggtgtaatcgtggctattcttgaaaagcaaccacttgagaatgag
ggtgttttggggacttctactgtgagagcttttgtcaagtgtttgggaattttggtcggg
ttttgtgataaggaagattggagttctgtggaagtgggttttgagtcacttgtaaagttc
tccattgataagcgtccaaaggtgaggaaatgtgctcaggattgtattctgactgttttc
aagtcatttggttcatcttcggtggctaagaaggctggtaaaagaatgtactccttgata
gaagataacatgacattggcaatgaaactaagtgctccaaaggaaataagtggatctaaa
gatgagcatcaagaggtgcttcactccctaaatatcctgaagcctattataccgtacctt
tcggtcaaagtcaagcagaagctacttgctcagctagtggagcttatgagttcccagagc
tcagcattcacaagacacatttttgataatattggggcaatattagatgcttcaggagtt
gaaattattcttcaagatgctgacaacgttataaaagcgcttatatcatacatatcgtct
gcggagaaccctgctgacaatgtattgcttgccgcaactttggcaaaaagcattattgag
aaacttcatgttggaggaataagtgtttggattacctatttgccgttggttgttgactcc
atatcaggtcttcttacacgtccggaaaatatcgctttacagtcttcaaatattttgaaa
gaactgatcattgcccatattgatgggaaagagtttttgaccggtaaaaagcaggcagtg
gatgatgagactctcaacagttctgaatttgcagcagtgaaagctatttttttagtcttt
gaagatctgcttatcagctcttctgaattcccaaacgaccatatcttggcgatactttcc
gttgtttttcttaaattgggtgaggtcttggacttatgcgcgaaaggtctaatacttaaa
cttgctgattggatgactgttgcttctggtggtgcttatgatacaaaaaatcttcaagtg
tgcataggagcagctgttattgctatgggaccagagaaactgcttgcgctgttacccatc
accctgaatgcaaaggattactccgtttcaaacacttggttgattcctattctaaataaa
tatgtatgtggatcatcgctagggttctttataaagcacatggtgccactagctgtctcc
ttcgaacaggcatcatcaaaagttaaaaagtcagtaattcgagaagaactgcaggcttat
gcccgtggatgttgggggctattacctgccttttgtcgcagtccatctgacgttcacaag
aatgcccaagctttgactacgcttttgattcctttcctcaagaaggagtcctttatgctt
gaaaatatttctgcagctttgcaggaactggtgaataagaataaaagtgcacttgcatct
gataacttttctgaagagcttatagttccccaaaaggaggatgaaaatctagagttggca
ttggagttcaaacgcaaatgctcttactcaaagaagcccgcaagcaaaaatattaaggct
ttggcatcttgctctgaggaatggcttcaggctttagtaaatgtcttttttaagtcatct
cctgcaaattaccagcaattcaaggaggcaatagagtgcttgacatccatcagtgattct
tcgacaacccaaaggatctttacttcctcaatggagagatccgggattacgaatggttct
ggtgaatacaggaagcttggatttcattctgatggttcaacagacaatgaagaaaataac
accactcttcttggggaagtagctaagaggtgcttgatcttggagctgggatcgtgcttt
gttgaaggagctagtgaggatctcatcaaaatcttctttggcattgctaaggatgttttg
gaggctactcatggggctggtcatcttgaagcatatcacattctaaatagaatattggag
aaaagttcctggtttcgctcttcacatgttgagcagctcatggatttattggctagtgta
aaacctccaactgatgtaaaatcacttaagagtcgctttgcctgctataaaaccttgttg
attgattcaatacagggaaatttggatgaggagaacacacaggcctttctcattctgaat
gagattattctcgcattaaaagattccacggaagaaggtagaaagacagcctatgatgtc
cttattggtgtgtgttctagcttgagagactcatcatctgctaagtcgaatgaatcttac
aagaagttcattgatatgattatagcttacctttctggttcgtcaccacatataaaaagt
ggagcagtctctgcactctctgttctggtatacagtgatgccgatatctgtgtctcagtc
cctgatctggtcccttccgttctgactctgctgcagagtaaagatgttgaagttacaaaa
gctgttctgggatttgtcaaagtaatggtatcgagcattcaagcaaaggacctgcacatt
ttgctctcggacattgtcaatggagtgctactctggtcatctgtgtcacggcatcatttt
agatcaaaggtcacagtcatcatggagatcttgatgagaaagtgtggagttgccgcagtt
aagtcaattgcagctgagaagtataaaaactttatcaagacagttgcagagaatcgccat
ggcaagacaagctctagagaagatggtacccctgagacggaatcaataccttcggattca
aggcagcggaaaaggaaggatagagaatctagtgattcactcaaggaaaaagactccaga
gaaccttacaaaaggaaaaagagagaggaggacgaaaaagattcatccacgaaattttcc
aaggaaggtgtcatgggaggtgggaaaagaaaaagggagatgaaaaggaagaacaacact
gccgatgaaccttatttctcttcaggcagcagtggtggtaagaatctggtaaaaagaaag
agagaattcaatcatcgcaaacaggaaggtgataaagcaccactacagaagagaggcgaa
ggaggcaagtttaagagggacttcccgggaaagggaaagacagaaaggcaaaaaaggcca
gctaatgatgtacgaggttcaggtgttgcacacaaaaggggtcagaatagaaggcagaaa
actaataaaaacagttag
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