Nicotiana tomentosiformis: 104109427
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Entry
104109427 CDS
T05025
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
nto
Nicotiana tomentosiformis
Pathway
nto02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104109427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nto02000
]
104109427
Transporters [BR:
nto02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104109427
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
104109427
NCBI-ProteinID:
XP_009617026
LinkDB
All DBs
Position
4:complement(3665075..3692896)
Genome browser
AA seq
1901 aa
AA seq
DB search
MEKKEKEKEMRNSRRQLKAMLRKNWLLKIRHPFVTCAEILLPTLVMLLLIAVRSKSDIRI
HPAQPYIRKGIGMFVEVGKGDTSPPFNQVLERLLAKGEYLAFAPNTTETRMMINILSLKF
PLLRLVTRVYEDEDALETYIRSDLYAAYDQTKNRTNPKIKGAVVFHEQGPQSFDYSIRLN
HTWAFSGFPDVKNIMDTNGPFLNDLSLGVNTIPILQYGLSGFLTLQQVMDSFIIYAAQET
MTNLLRLPSHSLDRDAQLKIPWTQFSPSNIRLAPFPTREYTDNEFQSIVKKVMGVLYLLG
FLYPISRLISYSVLEKELKIKEGLYMMGLKDEIFRLSWFITYAIQFALSSAILTVCTMST
LFQYSDKTLVFAYFFSFGLSGITLSFMISTFFTRAKTAVAVGTLCFLGAFFPYYTVNDET
VSMIVKVTASFLSPTAFALGSINFADYERAHVGLRWSNMWRESSGVCFLVSLLMMLLDSL
LYFAVGLYFDKVLHKENGFCYPIRSLLHKCFGRKKNTSDNYASTSEVKFSENHDETSGTD
FIKDVSGPILEAMSLEMKQQELDGRCIQIRNLRKVYATNRGNCCAVNSLRLTLYENQILA
LLGHNGAGKSSTISMLVGLVSPTSGDALVLGKNILTDMDEIRKSLGVCPQYDILFPELTV
KEHLEIFADVKGVPEDAKEKAVTEMVDEVGLADKLNTVVKALSGGMKRKLSLGIALIGNS
KVIILDEPTSGMDPYSMRLTWQLIKRKKKGRIILLTTHSMDEADVLGDRIAIMANGSLKC
CGSSIFLKHQYGVGYTLTLVKTAPGASVAADIVYRHVPSATCISEVAAEVSFKLPLASSS
SFESMFQEIERYMRRSNPKFETTDSREVDNLGIESYGISVTTLEEVFLRVAGGDFDQAQG
LEEKADPTFCDSVDLKVCQTNTSKTFFPSKLCGSYFRVIWLMLTLIGSACSLIWAAVSSV
ISLVTMQCCCCCILSRSTFWKHSKALLIKRAKSAQRDRKTVVFQLLIPAFFLLLGLLFLK
LKPHPDQQPVFFTTSYFNPLLSGGGGGGPIPFELTSPIAKEVSDHVHGGWIQKYRETTYR
FPDSTKAMNDAIEAAGSTLGPVLLSMSEYLMSSFNESYQSRYGAIVMDNQTGDGSLGYTV
LHNSSCQHSAPTFINLMNSAILRLATHNENMTILTRNHPLPQTASQHQQHHDMDAFSAAI
VINIAFSFIPASFAVAIVKEREVKAKHQQLISGVSILSYWASTYIWDFISFLFPSSFALI
LFWIFGLEQFIGKDSLIPTILLFLEYGLAMASSTYCLTFFFSEHSMAQNVVLLVQFFTGL
ILMVLSFIMGLINSTTHLNSLLKNFFRLSPGFCFADGLASLALLRQGMKNGSRDNVLDWN
VTGAAILYLAAEAILFFLLTLGLEFFPQQKRSLYRVHEWWKSLGKSKHATFFGSSEPLLR
PPSGDVASEFDEDIDVKAERDRVLSGSTDNAVIHLCNLRKIYPGGKSQVPKVAVHSLTFS
VQEGECFGFLGTNGAGKTTALSMLSGEEHPSDGTAFIFGKDIRSNPKVARRHIGYCPQFD
ALLEFLTVQEHLELYARIKGVPEYELEDVVMQKLLEFDLMKHANKPSFALSGGNKRKLSV
AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRRGKTAVILTTHSMNEAQALCTR
IGIMVGGRLRCLGSSQHLKTRFGNHLELEVKPVEVSCMDLENLCLLIQEKLFDIRPHSRS
ILNDIEVCIGGTNSIVSEDASAAEISLSKEMIMAVGQWFGNEERVKALVSATDDSCKIFG
DQLSEQLDRDGGLPLPIFCEWWLAKEKFSKIHSFIQSSFPGAAFQGCNGLSVKYQLPCGE
GLSLADVFGYIERNRNQLGISEYSVSQSTLESIFNHFAASS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaagagaaagaaaaagaaatgaggaattcaagaaggcaactcaaagctatg
cttaggaaaaattggcttctcaaaattagacacccttttgtcacttgtgctgagatttta
ctcccaactcttgtaatgctgttgttgattgctgtgagaagtaaatctgatatccgcatc
cacccagctcagccgtatatccggaaagggatagggatgtttgtggaagttgggaaaggt
gatacttctccccctttcaaccaagttctggagcgactattggccaagggggagtacttg
gcatttgcacctaatacaactgagacaaggatgatgatcaacattttgtctctaaaattt
cccctactgaggctagttaccagagtttacgaagacgaagatgcacttgaaacatatatc
cgttctgatctttatgctgcttatgaccaaactaagaaccgtacaaaccccaaaatcaaa
ggagcagtagtatttcacgagcaaggtcctcagtcatttgattatagcatacgcctaaac
catacttgggctttctcaggatttcctgatgttaaaaacataatggacacaaatggtccg
ttcctcaatgacttgtcattaggcgtcaataccataccaattttgcaatatggtctcagt
gggtttttaacactccaacaagtcatggactcattcataatatatgctgctcaagaaact
atgacgaacttattgaggttgcctagccactctcttgatagagatgcccagctcaagata
ccatggactcagtttagtccttcaaatataagacttgctccttttccaactcgtgaatat
actgataatgaattccagtccattgtcaagaaagtcatgggagtgctgtacttgctgggg
tttctttatccgatttctcgtctaataagttattctgtcttagaaaaggagctcaagata
aaagagggtctttacatgatggggttgaaagatgaaatattccgtctatcttggtttata
acatatgctattcagtttgctctttcttctgcgatacttacagtatgcaccatgagtacc
ctgtttcaatacagtgataagacgttggtgttcgcgtacttcttttcctttggtctcagt
ggaattactctctcatttatgatttccaccttcttcacaagagcaaaaactgcagtagct
gtcgggaccctttgtttccttggggcattctttccctattatactgtcaatgacgaaaca
gtctccatgatagtgaaagtgactgcttcttttctttcacctacggcctttgcattagga
tccatcaattttgctgactatgaacgtgctcatgtcggactccgttggagtaacatgtgg
cgggaatcttcaggagtttgctttttggtctctctcctcatgatgttacttgacagttta
ttgtactttgcagttggtctgtattttgataaggtcctccacaaggagaatggattttgt
tacccaatacgttccctgcttcacaagtgctttgggaggaagaaaaataccagtgataat
tatgcatccacctcagaagtcaaattctctgagaatcatgatgaaacaagtggcaccgat
tttataaaagatgtatctggaccaattctagaagcaatgagcttggagatgaagcaacaa
gaattagatggaagatgtattcagatcaggaatctgcgaaaggtgtatgctacaaacagg
ggaaattgttgtgctgttaattctttacgactgactttgtacgagaatcagattctggca
cttttaggacacaacggggctggtaaaagcagtacaatatccatgcttgttggtctcgtt
tctcctacttctggagatgctctggtgttgggaaagaacatcttaactgacatggatgaa
atacggaagagtctgggagtctgccctcagtatgatattctttttccggaattaactgtg
aaggaacatttagaaatttttgctgatgtaaagggtgttccagaagacgctaaagaaaag
gctgtgactgaaatggttgatgaagttgggttggcagacaaacttaatactgttgtcaaa
gctctttctggaggtatgaaaaggaagttgtcccttgggatagctcttataggaaacagt
aaggttattattcttgatgaaccgacaagtggaatggatccatactctatgcggttaact
tggcagctgattaaaagaaaaaagaagggaagaatcatattactcacaacacactccatg
gatgaagctgatgtgctaggagatcggattgctatcatggcaaatggatctctaaagtgc
tgtggaagttcaatcttcttgaaacatcagtatggggttggttacactcttactctggtt
aagactgcaccaggtgcctcagtagctgctgatattgtttaccgtcatgtaccatctgca
acatgcattagcgaagttgctgcagaggtttccttcaagcttcccctagcatcctcctct
tcctttgagagcatgtttcaagaaatagagcgctacatgagaagatccaaccctaaattt
gaaacaacagactctagagaggtcgacaatcttggtattgagagctatggcatatctgtt
acaactttggaggaagtgtttctgagggttgctggtggtgacttcgatcaagcacagggc
cttgaggagaaagcagatccaactttttgtgattctgttgatttaaaagtgtgccaaact
aacacttcaaagactttcttcccttccaaattatgtggaagctattttagagtcatatgg
cttatgctgaccttgattggttcagcttgtagtctaatctgggctgcggtttcaagtgtg
attagccttgttactatgcagtgctgttgctgttgtatactctcaaggtctactttctgg
aaacattcgaaagccctacttattaagagagcgaaatcagctcaaagagatcggaaaaca
gttgtgttccagctattaattcctgctttctttttgcttcttggtctgctgtttcttaag
ctaaagccacatcctgatcagcagccggtcttcttcacgacctcgtacttcaatccttta
ttaagtggtggaggaggaggtggtccaattccttttgaactcacatcgcctatagcaaag
gaggtttccgaccatgtccatggaggttggatccaaaagtatcgggagacaacatacagg
tttcctgattctactaaggcaatgaacgacgccatagaagcagcaggatcaactttgggc
cctgtcctactttcgatgagtgaatatcttatgtctagctttaatgaatcttatcagtcg
aggtatggagcgatagtcatggataatcagactggtgatggtagccttgggtacactgtt
ctacacaacagttcttgccagcattctgctccaacatttatcaatttgatgaattcagca
atactcaggctagctacacataatgaaaatatgacaattctcactcgtaaccaccctttg
ccgcagacagcaagtcagcatcagcaacatcatgatatggacgccttctctgctgcaatt
gtaatcaatatagccttttcttttattcctgcctcattcgctgtggcgattgtcaaggaa
cgtgaagtgaaagctaagcatcaacagctaatcagtggggtgtccatactctcatattgg
gcttccacatatatatgggacttcatcagcttcttatttccttcatcttttgcattaatt
ctcttttggatatttggtcttgagcaatttattggaaaggattctctcatcccaacaatt
ctgttgtttcttgaatatggattagcaatggcgtcatcaacatactgcctcactttcttc
ttttccgagcacagcatggctcagaatgtggtcctcctcgtccaatttttcactggcctc
attcttatggttctatccttcataatgggacttataaattctacaacacacttaaattct
ctgctcaagaacttttttagactgtctccgggattttgcttcgctgatggattagcttca
ttggctcttttaagacaagggatgaagaatggatctagagataacgttcttgactggaat
gtgactggtgctgctatattatacttggctgctgaggccattttgtttttccttttaact
ctggggcttgaattcttccctcaacaaaaaaggagtctttacagagttcatgagtggtgg
aaaagcttgggaaaatctaagcatgctactttcttcgggtcttcagaacctcttctgcga
ccaccctcaggtgatgttgcttctgaatttgacgaagacatagatgttaaagcagagaga
gacagggttttatctggctcaactgataatgctgttatccacctctgtaatcttcgaaag
atctatcctggagggaagtcccaagttccaaaagttgctgtccattcactgactttctct
gtccaagaaggagagtgttttgggttcctaggaactaatggagcagggaagacaacagca
ctgtcaatgctatctggagaagaacaccctagtgacggaacagcattcatttttggtaaa
gatatacgttcaaatcccaaggttgctcgtagacatattggatattgtcctcagtttgat
gctttactagaatttctgactgtccaagagcatcttgagctctatgcaagaataaaagga
gtaccggagtatgaattggaagatgttgttatgcaaaagttgctcgagtttgacctgatg
aaacatgcaaataaaccatcctttgccttaagcggaggaaacaagcgcaagttatctgtt
gcaattgcaatgattggagatcctcctatcgtcattcttgatgagccatccacaggtatg
gatcctattgccaaacgtttcatgtgggaagttatatctcgtctgtcaactagacgagga
aagacagctgtaattttaactactcacagcatgaatgaggcgcaagctctgtgcactagg
attgggataatggttggaggcaggttgaggtgtcttggtagttctcagcatttgaaaact
cgcttcgggaatcatctcgaactagaggttaaaccagttgaagtcagctgtatggatttg
gaaaatctctgcctgctaattcaagagaaactatttgatattcgtcctcactctaggagt
atattaaatgatattgaagtttgcattggaggtaccaactctatagtttcagaagacgca
tcggcagcagaaataagcctatcgaaggaaatgatcatggctgttggacagtggtttggc
aatgaagaaagggtgaaagcactagtatctgcaactgatgactcttgtaaaatttttggt
gaccagttgtcagagcagttagatcgtgatggtggactcccgttgccgatattctgtgag
tggtggttggctaaggagaagttctccaaaatccattcattcattcagtcttcatttcct
ggcgcagcatttcaaggttgcaatggattgagtgttaaataccagttgccttgtggagaa
ggtctttcacttgctgatgttttcggatacatagagaggaacagaaaccaactcgggata
tcagagtacagcgtcagccaatctacacttgaatcgatatttaatcatttcgcagctagc
tcctga
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