Nicotiana tomentosiformis: 104109486
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Entry
104109486 CDS
T05025
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104109486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104109486
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104109486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_RIG_2nd
DUF7165
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
104109486
NCBI-ProteinID:
XP_018630870
LinkDB
All DBs
Position
3:30725366..30732664
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AA seq
500 aa
AA seq
DB search
MKKLENLLFGSLYNSVGFGKDDEEEKRNDGENDSAMFFVDRFADSALSVYEGDAQLVPQG
IHIVGKEERKPVWVDDAEEKTSIKIASVNRLRKLRKEEGEDVISGSTYVARLRAQHAKLN
PGTEWAQIDSQGISYSSDDEDSDEESKHTEGYGSKNVKLVGDILQSNEDLVVKSRTKLLP
GLLEYSRLVDANAPDPSNAPINSVQFHRNSQLLLVGGLDKKLRFFQIDGKRNTKIQSIFL
EDFPIKKASFLPNGCQVIISGRRKFFHVLDLVKASVDKIGPLVGREEKSLESFEVSPDSD
TIAFLGNEGYILLVSSKTKELIGSLKMNGTVRSVAFTNDGQQLLSSGGDSQIYHWDLRTR
TCIHKGVDEGSINGTALCTSPNGSLFAAGSDSGIVNIYNREEFLGGKRKPIKAIENLTTK
VDFMKFNHDAQILAISSSMKKNSSKLIHIPSFTVFSNWPSPNQAVHYPLCLDFSPHGGFM
AMGNAEGKVLLYKLHHYHDA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcttgagaacttattgtttggctccttgtacaattctgttgggttcgggaag
gacgatgaagaagaaaagagaaatgatggcgaaaacgattctgctatgttctttgtggac
cggtttgcggatagtgcgttgtctgtttatgagggggatgcacagctggtgccacaaggt
atccacattgtgggaaaggaggagcggaaaccggtgtgggtagatgacgcagaagagaag
actagtatcaaaatagcaagcgtgaacagattgaggaagctgaggaaagaagagggtgag
gatgtcatatctggttccacgtacgtggcgagactaagggctcaacacgctaaacttaat
ccaggcactgaatgggcccaaattgattctcaaggcataagctacagttctgatgatgaa
gattctgacgaggaaagtaaacatactgagggctacggttcaaagaatgtcaagttggtc
ggtgatattcttcaatcaaacgaagatcttgttgtcaaaagtcgcacaaagttgttacct
gggcttcttgaatattcgagactggttgatgcaaatgcacctgatccttcaaatgcacca
ataaattctgttcagttccacaggaattctcagttgctccttgttggtggattggataaa
aaactcagattttttcagattgacgggaaacgaaatacaaagatacagagcatctttctt
gaggattttccaattaaaaaggcatctttcttacccaatgggtgtcaagttattatatca
ggaagaagaaagttctttcatgtcttagacttggtcaaagcaagtgtagataaaataggt
cctctagtcggcagggaagaaaagagcctggaaagttttgaggtttctcctgattcagat
acaattgcttttcttggtaatgaaggatacattttgctagtttcctccaaaacaaaggag
ctaattgggtcactgaaaatgaatggaactgttcgctcagtggctttcaccaatgacgga
caacaattattgagctctggtggagacagccagatttaccattgggatttgagaacaaga
acttgcattcataaaggtgttgatgaagggtccataaatggtacggctctttgcacttca
ccaaatggtagtttgtttgctgctggttcagacagtgggatagtaaatatttataacaga
gaagagtttttgggcggaaagagaaaaccaatcaaggcgattgagaatctcacaacgaaa
gtggattttatgaaattcaatcatgatgctcaaatattagccatcagttctagcatgaag
aaaaacagctcaaagctaattcacattccatcatttacagttttttcaaactggccttct
ccaaatcaagccgtgcactatccgctctgtttggattttagtcctcatggaggattcatg
gctatgggaaatgctgaaggaaaagtgttactgtacaagttgcatcactaccatgatgca
tag
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