Nicotiana tomentosiformis: 104109821
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Entry
104109821 CDS
T05025
Name
(RefSeq) clathrin heavy chain 2-like
KO
K04646
clathrin heavy chain
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04142
Lysosome
nto04144
Endocytosis
nto05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104109821
04142 Lysosome
104109821
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104109821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104109821
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nto04147
]
104109821
Membrane trafficking [BR:
nto04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104109821
Exosome [BR:
nto04147
]
Exosomal proteins
Proteins found in most exosomes
104109821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Totivirus_coat
TPR_Vps41
IcmW
Motif
Other DBs
NCBI-GeneID:
104109821
NCBI-ProteinID:
XP_009617483
LinkDB
All DBs
Position
3:62429721..62441771
Genome browser
AA seq
1705 aa
AA seq
DB search
MAAANAPITMKEALTLQSIGVNPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTSQDHLQIFNIEAKQKMKSYQMPEQVVFWKWI
TTKMLGLVTQTSVYHWPIEGDSEPIKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAAAFATFRVPGNDRDSVLISFATKSSNAGQVTS
KLHVIELGAQPGKPAFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSIGGFYAINRRGQVLLATVNEATLVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFALTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYAPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKGGLYMRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRDINRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATHFLDVIHAAEDADVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLPNVGDKLFDEGLYEAAKIIFAFISNWAKLASTLVKLNQFQGAVDAARK
ANSAKTWKDVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPDAWDHMQFKDIVVKVANVELYYKAVHFYLKEHPDLINDMLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESTDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQSEAKAKENEEKDVIKQQNMYAQLLPLALPAPPMPGMGGAGMGGGF
APPPPMGGMGMPPMPPFGMPPMGSY
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctaacgctccgatcaccatgaaagaggccctcacgttgcaaagtattggg
gtgaacccgcagttcatcacgttcacgaatgttaccatggaatcggataagtatatatgt
gtaagagagacggcccctcagaatagtgtggtgattattgatatgaacatgccaatgcaa
cctttgaggcgtccaattaccgctgattctgctcttatgaatcctaattctagaattttg
gctctaaaagctcaagtcccgggaactagtcaagatcacttgcagattttcaatattgag
gcaaagcagaaaatgaaatcatatcagatgcctgagcaggttgttttctggaagtggatt
acaacgaagatgttaggtcttgttactcaaacgtcagtctatcattggccaattgaaggg
gattctgagcctataaagatgtttgatagaacagccaatttagccaacaaccaaataatt
aactaccgatgtgatccttcagagaaatggttggttttgattggtatcgcgccaggttca
ccagagaggccccaactagtcaaagggaacatgcaattattttcagtagatcagcaacgc
agtcaagctctcgaggcacatgctgcagcatttgccacattcagggttcctggaaatgat
agggattccgtactcatttcttttgccacaaaatcctcgaatgctggacaagtcacatca
aagttgcatgtcattgagcttggagcccagccagggaaaccagcttttacgaagaaacag
gcagatctattctttcctccagattttgctgatgatttcccagttgccatgcagatatct
cataaatacagtttaatttatgtcatcacaaagcttgggcttctctttgtctatgacctc
gaaacagctactgcagtatacaggaataggatcagcccggatcctatttttctgacagca
gaagcttcatctattggtggtttctatgccatcaacagacgaggtcaagtgttactggcc
acagtgaatgaagcaactctagtaccttttgtcagtggccaattgaataatctggagctt
gctgttaatcttgccaaaagaggaaaccttcctggagctgagaatttggttgtccagcgg
tttcaagagttgtttgccctgacaaaatacaaagaagctgctgagcttgcagcggaatca
ccacaaggcatactccgtacgcctgacactgttgccaaatttcagagtgttcccgttcaa
gcagggcaaacgcctccgctattgcagtactttgggacacttttaacaaaagggaagcta
aacgcttttgaatcattagaattgtcgcgccttgttgtcaaccagaacaagaaaaacctg
ttggagaactggttggctgaggataagctggagtgtagtgaggaactcggggatcttgtg
aagactgttgataatgaccttgccctgaaaatatatatcaaagcaagagcgactccgaaa
gttgttgctgcttttgctgagcgcagggagttcgataagattctgatatattccaagcag
gttggatatgcacctgactacttgttccttcttcaaaccattctgcgatctgatcctcag
ggagctgttaactttgcgctcatgatgtcccaaatggagggcggttgtcctgttgattac
aacactatcaccgatctatttcttcagaggaacatgatccgtgaggcaacagcattttta
ctggatgttctgaaacctaaccttccagagcatggctttctgcagactaaggtcttggaa
atcaaccttgtgactttcccgaatgttgctgatgctatattagcaaatgggatgttcagt
cattatgatcgacctcggattgctcagctttgtgagaaaggtggtctttacatgcgggct
ctgcagcactattctgaactgcctgatatcaagcgtgttattgtgaatacacatgcaatt
gagcctcaggccttggttgagttctttgggactctttcacgtgaatgggcactggaatgc
atgaaagacctccttgttatcaatatcaaaggaaaccttcaaataattgttcaggttgca
aaagagtactgtgagcagttgggtgttgatgcttgcataaagctttttgagcaatttaag
tcttatgaggggttatatttcttccttggatcatatttgagttccagtgaggatcctgat
atccactttaaatatattgaggcagctgccagaactggacaaatcaaggaggttgagcgt
gtcacaagagaatcaaacttctatgatgcagaaaagacaaagaacttcttgatggaagcc
aaacttcctgatgctcggcctctgattaatgtttgtgaccgctttggttttgttcccgat
ctcacacactatctctataccaacaatatgctacggtatattgaaggttatgtccagaag
gtcaatccaggaaatgctcctttagttgtagggcagcttttagatgatgagtgtcctgag
gacttcattaagggattgatcctgtctgtgcgttctctgcttccagttgagcccttggtg
gaagaatgtgaaaaaaggaatcgactccgcttgctgacacagttcttggagcatcttgta
agtgaaggaagtcaagatgtgcatgtacacaatgctctgggaaagatcatcattgatagc
aataacaacccagagcatttcctcacaaccaatccatactatgactcgcgcgttgtgggt
aaatattgtgagaagcgcgatcctacccttgctgttgttgcatataggagagggcaatgt
gatgatgaactcattaatgtgacaaacaagaactctttgttcaaacttcaagcgaggtat
gtggttgagaggatggatggtgatctttgggagaaagttcttaaccccgaaaatgagttt
agaaggcagcttattgatcaagttgtttccactgctttgcctgaaagcaagagccctgag
caagtttctgcagctgttaaagctttcatgactgctgatcttcctcatgaactaattgag
cttcttgaaaagattgttctccagaactctgcattcagtgggaactttaatttgcagaat
ttgcttatcctgacagccatcaaagccgatccatccagagtaatggactatatcaatagg
cttgataattttgatggacctgcagtaggggaggttgctgtagaagcccaactttacgaa
gaagcttttgctatattcaagaagttcaatctgaatgtccaggctgttaatgttctgctc
gacaacattcgtgatattaatcgggctgtggagtttgcattccgagttgaagaagatgct
gtttggagccaggtggctaaagctcaactgagagaaggattagtgagcgacgctattgag
tcatttattcgtgcagatgacgccacccactttttggatgtaattcatgctgcagaggat
gcagatgtttaccatgacttggttaagtatttgctgatggtaaggcagaagacaaaagag
cccaaagttgatagtgaactcatttatgcatatgctaaaattgatcgattgggtgacatt
gaagaatttattctcatgccaaatgttgctaatctaccgaatgttggtgataagctgttt
gatgaaggcttatatgaggctgcaaagatcatattcgctttcatttctaactgggccaag
ttggcgagcacgcttgtgaagttaaatcaatttcaaggtgctgtcgatgcagcacgcaag
gcaaatagtgctaagacatggaaagatgtctgctttgcttgtgttgatgctgaggagttc
cgtttggctcaaatttgtgggcttaacattatcgttcaggtagatgacttggaggaagtt
agtgaatattaccaaaatagaggatgtttcaatgaattaatctctcttatggagagcggg
ctgggattggagcgtgcacatatgggtatcttcacagaacttggtgttttatatgccaga
taccgtcacgagaagctcatggaacacattaaattattctccaccagactcaacattccc
aagcttattcgtgcctgtgatgagcagcaacactggaaggaactcacatatttgtacatc
caatatgatgaatttgataatgctgccactactgtcatgaatcattctccagatgcctgg
gatcatatgcagttcaaagacattgttgtcaaagttgctaatgtggagctttattacaag
gccgttcacttctatttgaaagagcatccggatctcattaatgatatgctaaatgttctt
gcacttagagtggatcacacacgcgtagtggacataatgagaaaggctggtcaccttcgc
ctagtcaagccttacatgattgctgttcagagcaacaacgtttctgcagtgaatgaggcc
cttaacgaaatttatgttgaggaagaagactatgatagactacgtgaatcaactgatttg
catgataacttcgatcagattggccttgcacagaagatagagaaacatgagcttctcgag
atgcggcgtgttgctgcctatatctataagaaagctggtaggtggaagcaatccattgct
ctgtcaaagaaagataatctctacaaagatgccatggagacagcctcacaatctggagat
cgcgaacttgcagaggagttgcttgtttactttattgaacagggaaagaaagaatgcttc
gcatcatgcctgtttgtttgttacgatttgattcgcccagatgttgcccttgagcttgcc
tggatgaataatatgattgactttgcattcccttacctgttacagtttatccgtgaatac
actggcaaggttgatgagctaataaaagataagattgaggctcaaagtgaagcaaaagcc
aaagagaatgaagagaaggatgttattaagcagcagaatatgtatgcacagctactgcca
ttggctttgcctgctccaccaatgccaggtatgggaggtgcaggcatgggaggtggtttt
gctcctcccccgcctatgggtggaatgggaatgcctcccatgcctccatttggcatgcca
cccatgggttcctactaa
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integrated database retrieval system