Nicotiana tomentosiformis: 104109833
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Entry
104109833 CDS
T05025
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104109833
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104109833
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Toxin_13
NosD
Motif
Other DBs
NCBI-GeneID:
104109833
NCBI-ProteinID:
XP_009617495
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Position
2:complement(93128930..93132198)
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AA seq
451 aa
AA seq
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MGGPKLINLSLFLFSTFLAIIPSLNGHIGDFDEVWRRRAQEAEEWALKAYEPDPVNVTLA
FAKQTKESMKELKEVKKLATNDTRRELRGFHKNYAGPCLVTNPIDRCWRCQGNWADNRKR
LADCALGFGKGTTGGKAGRFYVVTDSSDDSSNPKPGTLRHAVIQKEPLWIIFAKSMNIRL
HQELIMQSDKTIDGRGVNVHIAYGAGITLQYVKNVIIHGLHIHDIVVGNGGMVISAVDHV
GIRTQSDGDGISIFGSSNIWIDHVSMWRCSDGLIDAVEGSTAITISNGHFTDHNEVMLFG
ASDSSSIDQRMQITVAFNHFGKRLVQRMPRCRWGFIHVVNNDYTHWNMYAIGGSQHPTII
SQGNRFIAPPEMFKKEITKRDYAPESVWKQWTWRSQGDLFMNGAFFVESGDPDWTKKHQN
LFDGISSAPGEQVTWITRFAGALNCKQGHAC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacctaagctgataaatttgtctctgtttctattttccacttttttggctata
attccaagcttaaacggtcacattggtgactttgatgaagtgtggcggaggcgagcccaa
gaagcagaagaatgggcccttaaggcctatgagcccgacccggttaatgtcacccttgct
tttgccaagcaaactaaggaatcaatgaaggaattaaaggaagtgaagaagctggcaaca
aatgacacaaggagggagttaagaggttttcacaaaaattacgctgggccttgtttagtc
accaatcccattgataggtgctggagatgccaaggtaattgggccgacaatcggaaaaga
ttagcagattgtgcattgggctttggtaaagggaccaccggcggcaaagccggccgattc
tacgtcgtcactgattcttccgacgacagtagcaaccctaagccgggaaccctacgtcac
gctgtcattcaaaaggagccattgtggatcatttttgcaaaaagcatgaacattagatta
catcaggagctgataatgcaaagcgataagaccattgatggtcgtggggttaacgttcat
attgcatatggcgcaggtatcaccttacagtacgtgaagaacgtgatcatccatggtctc
cacattcacgacattgtcgtaggcaatggtggcatggtcataagcgcggtggaccatgtc
ggaataaggacacagagcgatggagatggtatttccatatttggttcatccaatatttgg
attgatcatgtctcaatgtggcgttgtagtgatgggcttattgatgctgtggagggatca
actgctattaccatatcaaatggacatttcaccgatcataatgaggtgatgctttttggt
gcaagtgacagttcttcaattgatcaaaggatgcaaattactgtggctttcaatcatttt
ggtaagagattggtacagagaatgccaaggtgcagatggggttttattcatgttgttaac
aatgactacactcattggaatatgtatgctattggtggtagccaacatcccactattatt
agtcagggcaatcgtttcattgctcctcctgaaatgttcaagaaggagataacaaagagg
gactatgccccagaatcagtgtggaaacagtggacatggagatcacaaggtgatctattc
atgaatggagcattctttgttgaatctggagatccagattggaccaagaaacaccagaac
ctttttgatgggatatcatcagccccaggggaacaagtcacttggattacaaggtttgca
ggggcactcaattgcaagcaaggacatgcttgttaa
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