Nicotiana tomentosiformis: 104110159
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Entry
104110159 CDS
T05025
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104110159
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104110159
REST complex
104110159
Heterochromatin formation proteins
Other heterochromatin formation proteins
104110159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
104110159
NCBI-ProteinID:
XP_009617900
LinkDB
All DBs
Position
2:complement(123494962..123506930)
Genome browser
AA seq
1358 aa
AA seq
DB search
MKRLRDDVYANPQFKRPFGSSRGESYGQSQVPGSGAGGGGSGVGGTGGGVGASASTQKLT
TNDALSYLKEVKDMFQDQREKYDLFLDVMKDFKAQRIDTAGVIARVKDLFKGHPNLILGF
NTFLPKGYEITLTEEEEAPPKKTVEFEEAISFVNKIKKRFQNDDHVYKSFLDILNMYRKE
HKGITEVYQEVAALFEDHPDLLDEFTRFLPDSSATASATQTSMGRPSFHRYDERSSATLL
RQPHMDKQRFRRDRIISPHAEHDPSAEHPEMDGDKTMIKLHKEQKRRAEKDNRDRRSRDQ
DYREPDNENNGDIGMHRIADKRKSARKVEEFGGTYDDKDGVKNMYSQEFTFCERVKERLR
SPTDYQAFLKCLHIYSTEIISRKELQSLVADLLGKHPDLMEGFYEFLERCERIDGYLAGV
MSNKSLWNEGHTSKSVKEEEKDKEQKREIDGGKEKDRYKEKYWGKSIQELDLSNCKRCTP
SYRLLPEDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDR
FELDMLLESVSSTAKRAEELLNALNDNSVGVDGPIRIEDHFTALNLRCIERLYGDHGLDV
MDILRKNPPLALPVVLTRLKQKQEEWTKCRSDFNKVWADIYSKNHYKSLDHRSFYFKQQD
SKNLSTKSLVAEIKEIKEKKQKEDDMILAIAAGSRHPISPHLEFEFAYSDVHEDMYKLIK
YSCEEVCSTEEQLNKVLRLWTTFLEPIFGVPYRHHGSEATDDDVLSKHHGLKSNGASIGE
SDRSPSADATTTKFKQSKDICNGDANSSPQRLNSSRAIFTNTDARPKEDGLAVTGERLLS
SDAVATLGADNVCARLESTSGRGTRPGNDAAEDGLGAKSNTDNVPISEGGTSRSLPLANG
GFAEGSRIDGFNADSVDPSKNEKEEGELSPNRDFEEDNFVGFRDGAARNGNMQYQSGGAE
MVGCQDTAGENDADADVEDSENVSEAGDVSGSESAADECSREEHEEEDDGEHDELAGKVE
SEGEAEGTSEANFVGGDGTVLQMSERFLLTSKPLAKHVVSPHCGGAKNDLRVFYGNDDFY
VLFRLHQILYERLLSAKLNAASSESKWRTGEDTGSDPYARFMSALYSLLDGSADNAKFED
DCRSIIGNQSYVLFTLDKLIYKLVKQLQTVSSDELDGKLLQLYEYERSRKPEKYVDSVYY
ENAHVLLHEENIYRFESTSSPTRVSIQFMDDGSEKSEVVAVYVDPNFAGYLYNDYLSVEH
GKKESSAVMLKRSVSRNKRKDTDHDVSSALCMVMENIILVNGLECKMASNSSKISYVLDT
EDFFYRLGRKRKKISAGRLLWHGQARVARFHRVLTSSL
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattacgggatgatgtttatgctaatcctcaattcaagcgcccatttggttct
tcccgtggagaatcatacggccaatcacaggttcctggaagtggtgctggcggcggaggc
agtggtgttggcggcactggagggggtgttggtgccagtgctagcacccaaaagttgaca
actaatgatgcattgtcttatttgaaggaagttaaggacatgtttcaagaccaaagggag
aagtatgacctgttccttgatgttatgaaagactttaaggctcaaagaattgacactgcc
ggtgtcatagcaagagtaaaagatttgtttaaagggcatccaaatttgatccttgggttc
aatactttcttgcccaagggctatgaaataaccctcactgaagaagaggaggctcctcca
aagaaaacagttgagtttgaagaagctatcagctttgtgaacaaaataaagaaacgtttc
caaaatgatgatcacgtgtacaagtctttcttagacattttgaacatgtataggaaggaa
cacaagggcattactgaggtgtaccaggaggttgcagcactttttgaagaccatcctgat
ttgctggatgagttcacgagattcttgccagattcttcagctactgcatcagcaacacag
acttcaatgggccgaccttctttccatcgttatgatgagaggagctctgctacattgctt
cggcaaccacacatggacaagcaacgtttccgccgggataggattatcagtcctcatgca
gaacatgatcctagtgctgagcaccctgaaatggacggtgataaaacaatgataaagttg
cataaagagcaaaagaggcgtgctgaaaaagacaacagggaccgcagaagtcgcgatcag
gattatagagaacctgataatgagaataatggagatataggcatgcaccgcattgctgat
aaaagaaaatctgctcggaaggttgaagagttcggaggcacttacgatgataaagatggc
gtgaaaaatatgtatagccaagagttcactttctgtgaaagagtaaaggagagactacgc
agtccaactgattatcaggcattcctaaagtgcctccatatttatagtacagaaataatt
agcagaaaggagttacaaagtttggttgctgatttacttggaaagcatcctgatcttatg
gaggggttctatgaattcttggagcgctgtgaacgaattgatggatatctcgcaggtgtt
atgagcaacaaatctttgtggaatgaagggcatacatcaaagtcagtgaaggaggaggag
aaagacaaagaacagaagcgtgaaattgatggaggtaaagaaaaggaccggtacaaggag
aaatactggggaaagtccattcaagagcttgacctttcgaactgtaagcgctgcactccc
agttatcgacttcttcctgaagattatccgatacctacagcaagccaaaggtcagagctc
ggggctcaagtgttaaatgatcattgggtatctgtgacctcaggaagtgaggactactct
tttaagcacatgcgcagaaaccagtatgaagaaagcctgtttcgatgtgaagatgatagg
tttgagctagacatgttattggagtcagtgagttcaactgctaagcgtgcagaagagttg
ttgaatgcccttaatgataattcagttggtgtggatggcccaatccgcatcgaagaccac
ttcacagcactgaatttaaggtgcattgaacgtctctatggtgaccatggcctggatgtg
atggacattttgcggaaaaacccacctcttgctctgcctgttgtattaacccgcttgaag
cagaaacaggaggagtggacgaagtgtcgctcagacttcaacaaagtttgggctgacatt
tattctaagaaccattacaagtcgcttgaccaccgaagtttctatttcaagcaacaagat
tcaaagaaccttagcacaaaatccttagtggcggagatcaaagaaattaaggagaaaaag
cagaaagaagatgacatgattcttgctattgccgctggtagtagacatccaataagtcct
catcttgaatttgaatttgcttattctgatgttcacgaagacatgtacaaacttatcaag
tattcttgcgaagaggtttgttccacagaagagcagttaaataaagttctgaggctgtgg
accacctttcttgaaccaatctttggtgttccttatcgtcatcatggctctgaggctact
gacgacgatgtcttgtcaaagcatcatggtttgaagagcaatggagcaagcattggcgaa
agtgatagaagtccaagtgcggatgctaccactactaagtttaagcaatcaaaagatatc
tgcaacggagatgcaaattcttcccctcaacgactaaattcttccagggcaatctttact
aatacagatgctcgccccaaggaagatggattagcagtaactggtgaacgcttacttagt
tctgatgcagttgctaccctcggagcagataatgtttgtgcaagattggaaagtacttca
ggccgcggcacacgacctggtaatgacgctgctgaggatggcctaggagcgaagtctaat
actgataatgtgccaatttcagagggtggcacttcaagatcactacccttggcaaatggc
ggatttgctgaaggttctagaattgatgggtttaatgctgattctgttgatccctctaaa
aatgagaaagaagaaggtgagttgtcgcctaatcgggattttgaagaggacaattttgtt
ggctttcgagatggtgccgcacgcaatggaaatatgcaatatcaatctggaggtgctgaa
atggttggttgtcaggatactgctggtgaaaacgatgcagatgctgacgttgaagatagt
gaaaatgtttccgaggccggagatgtttcaggtagtgagtctgctgctgatgagtgctct
cgggaggagcatgaggaagaagacgacggagagcatgacgagcttgctggtaaagttgag
agtgaaggtgaggctgagggcacgagtgaagcaaactttgttggaggtgatggcactgtg
cttcaaatgtctgaacgttttttgcttacttcaaagcctcttgctaaacatgtggtttca
cctcattgtgggggtgcaaagaacgaccttcgagtcttttacggaaatgacgacttttat
gtgctttttaggcttcatcagattttgtatgaaaggttattatcggcaaagctgaatgca
gcatcatctgaatcaaagtggagaactggagaggatactggttctgatccatatgccaga
ttcatgagtgcactgtatagtttgctagatggatctgcagataatgcaaagtttgaggat
gattgccgatcaatcattgggaatcagtcatatgtgctatttactttggacaaactgata
tataaactggtcaagcagcttcaaactgtttcaagtgatgagctagacggtaagctgctt
cagttatatgaatatgaaagatcacggaaacctgagaagtatgtcgattcagtttattac
gaaaatgctcatgtcctcctccacgaggagaacatttaccggtttgaaagtacatcttcc
ccaactcgtgtgtctattcagttcatggatgatggaagtgagaagtctgaagttgttgca
gtttatgtagaccccaattttgctggttatctgtataatgattatctatctgttgaacat
gggaagaaagaatcgtctgcagttatgctgaagagatctgtgagcagaaacaagagaaaa
gatactgaccatgacgtatcttctgccctgtgcatggtgatggaaaatattatactcgta
aatggcttggaatgtaagatggcttcaaattcatcaaagatttcttatgtactggacaca
gaggacttcttttaccgtcttggaaggaaaagaaaaaagatttcggcaggcagattattg
tggcatggccaggcgagagtagcacgcttccaccgtgttttgacatcctcgttatga
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