Nicotiana tomentosiformis: 104110164
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Entry
104110164 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104110164
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104110164
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
104110164
NCBI-ProteinID:
XP_018631126
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All DBs
Position
11:113463016..113466789
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AA seq
473 aa
AA seq
DB search
MEKVYKVSGGDDLMEFYKREIGFSQPRKFSRRISASEAMVKRLDLYGKLTGHEGCVNTID
FNATGDVLVSGSDDRRVIQWDWATRTSKLSYPSGHMDNIFQAKFMPFTDDRKIVTASADG
QVRLGLLLENGRVETKRVGKHQGRVHKLAVEPGSPYILYSCGEDGFVQHYDLRSNSSSKL
LRCSSFAENNKHSSSIRLNGIVIDPRNPNYFAVGGSDEYARVYDIRMYQMDARTSSDRPI
NTFCPHHLIKTNDVHITALTYSNTSELLVSYNDELIYLFQKNMGLSPAPLSLQGEDLDKL
EKPQVYSGHRNSQTVKGVSFFGPNDEYVLTGSDCGHIFIWKKKDAKLVRLMVGDRHIVNQ
LKPHPCIPVLATCGIEKTIKIWAPTSKDVTPLPPDVQEIMEANRRGREDHSRVTLTPDMI
MHVLRLHRRQALAYIERRENSEDVDSDEDEGGGAFVLGFSDGEEGENSECSIS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtgtacaaggtttctggtggagatgatttaatggagttttataaaagagaa
attgggttttctcagcccagaaaattctctcgccgaatttctgcttctgaggctatggtc
aagcgactggatttatatggcaagttaactggtcatgaaggatgtgtaaacacaatagac
ttcaatgccaccggtgatgttcttgtctcgggttctgatgatagaagagtgatacaatgg
gactgggcaacgagaacctcaaagttgtcttatccatcaggtcacatggacaatatattc
caggcaaagttcatgcccttcacggatgatcgtaaaatagtaactgcatccgctgatggt
caggtgaggcttggtttattgctggagaatggtcgggtagaaacaaaaagagtaggaaag
caccaaggtcgtgtacataagcttgctgtggaaccaggaagtccctacatactttatagc
tgcggtgaagatggttttgttcaacactatgatctgcgcagtaattcttcctcgaagctt
ttacgttgctcgtcatttgcggaaaacaataaacactcgagcagcataaggttgaatggc
attgtgatagacccaagaaatcctaactactttgctgtaggaggttccgatgaatatgcg
cgtgtatatgacatcagaatgtaccaaatggatgcaagaaccagttcggataggccaatc
aacacattttgtcctcatcacctgattaagacaaatgatgttcatattacagcactgact
tactcaaacacaagtgaattgctggtttcatacaatgacgaactgatatacttgtttcag
aagaacatgggattgagtccggctcctttgtctttgcaaggtgaagacttggacaagttg
gaaaaaccacaggtttattcaggacacagaaattcacagacagttaaaggagtgagtttc
tttggtccgaatgatgaatatgtattgaccgggtctgattgtgggcatatatttatctgg
aagaaaaaggacgccaagcttgtccgcttgatggtcggtgataggcacattgtaaatcag
cttaagccccatccctgtatccctgttcttgctacatgtggaatagaaaagaccataaag
atttgggctcccacatccaaagatgttactcctttgcctcctgatgttcaagagataatg
gaagctaataggcgaggccgagaggaccactcaagggttacactcaccccagacatgata
atgcatgttttacgtctgcacaggaggcaagcactggcttatattgagagacgagaaaat
tcggaggatgttgatagtgacgaggatgaagggggaggcgcttttgtgttaggattctca
gatggtgaggagggagaaaattccgaatgcagcattagctag
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