Nicotiana tomentosiformis: 104110269
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Entry
104110269 CDS
T05025
Name
(RefSeq) autophagy-related protein 13a-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
nto
Nicotiana tomentosiformis
Pathway
nto04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104110269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104110269
03029 Mitochondrial biogenesis [BR:
nto03029
]
104110269
Membrane trafficking [BR:
nto04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104110269
Atg1 complex
104110269
Mitochondrial biogenesis [BR:
nto03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104110269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
104110269
NCBI-ProteinID:
XP_009618019
LinkDB
All DBs
Position
6:complement(64259255..64268680)
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AA seq
612 aa
AA seq
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MDFQSNPQGGEHGRFEQILAQFLLKSLHIILDSRIPSIRPYGGSGEVKKSDRWFNLVLGD
RPAVLDNLNLLHRNLVEPMIIDIILVQDKSSTSLEHDSSTGFAGGYTETVVERWVVQCEN
RRSMVLHMGDSSFKKTYKKCIILLRSLYSMMRLLPAFKAFRKLSLSSQSCYFDINYKVSS
FSELFSRAEEALMKQYTFIPVDSQQGRLALSVTYRENLADFNLETSASFPPEIITDYVGS
PLTDPMRSFPSTSMDKGRSLRRTQSSSSAPVQRPQSWTSGLLRAPSLPQPYVGSPPLYRA
PYELSTSPSDVYGQRVPPNYRLPTLQKATNYDDDQISPPFSPSPSPSPPTYFSGANPVQT
RLRSETVPVSIPHPLMGRSSKHISPNLSDPNRHSLPPMSPRSTKHDSSSHESPSGIRSSR
KVDLLRAPESDTGTTNPGQKVSTDARDDSGRFSGLLSSSGSPRAGFSRSSSRLSFQDDLD
DCDFSCPFIVDDVDNADSRARCLLFLLCRETLDSKKGSDTSSQASATTRKSQDAAVGALV
HMLRTAPPLRQDSSCYTPRSVKTEVEGETGTASGFYVPRKALDALEELKTYTQLKDMLLS
KSTTRSGSEGGT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagagtaacccacaggggggtgaacatggaagatttgagcaaatacttgct
caatttcttcttaaaagcttgcatattattttggactcaaggattccttcgatacgacct
tatggtggtagtggggaagtgaaaaagagtgacaggtggttcaatttggtgttgggagat
cgtcctgctgttcttgataacttgaatctgttgcaccggaatttggtggaaccgatgata
atagatataatacttgttcaggataaatctagtacttcattggagcacgattcgagtaca
ggatttgcaggaggatatacagaaactgttgtggagaggtgggttgtacaatgtgagaat
cggaggtcaatggttctgcacatgggtgattcctctttcaaaaaaacatacaagaaatgc
attatactactccgctcgctttattcaatgatgaggctcctgcctgcattcaaggccttc
aggaaactatcattgtcaagtcagagttgttattttgatatcaattataaagtgtcttca
tttagtgagctattctcaagggcagaggaggcgttgatgaagcaatatacttttattcca
gttgattcccagcaaggccgacttgctttatctgtgacatatcgagaaaatctggcggac
ttcaacctggagacttctgcatcctttccgcctgagatcattacagattatgttggcagt
ccactcactgaccctatgaggtcattcccttctacctcaatggataagggtcgttcattg
agaaggacacagtcatcttcttcagcaccagttcagcgtccacaaagttggaccagtggt
ctcctcagggcaccatctttacctcagccatatgttggatctccacctttgtaccgtgca
ccatatgagctttcaacttcgcccagtgatgtgtatggacagagggttccacctaactac
agattgcccactctccagaaagcaactaattatgatgacgaccagatttcccctccattt
tcaccatctccatctccttctccacccacatatttctcaggtgcaaatcctgtgcagact
cgtttgcgttcagaaactgttcctgtcagtatccctcatccattgatgggcagaagttcc
aaacacatatctcctaatttgtctgatccaaacaggcattctctcccacctatgtcacct
agaagcacaaagcatgattcttcatcccatgaatccccttctggaatcaggtcatcgaga
aaagtggatttgctaagggctccagagtcagatactgggactactaatcctggacaaaag
gtgtctacagatgctagagacgattcaggacggttttcaggtttactatcttcaagtggt
tcaccacgtgctgggttttctagaagttctagcagactatcttttcaggatgacttggat
gactgtgatttttcttgtccttttatagttgatgatgttgataatgctgattctagagcc
aggtgtttattgttcttgttatgcagagagacccttgattcaaaaaaaggttcagacaca
tcttctcaagcatctgcaaccaccagaaaatctcaagacgctgctgtaggtgcccttgtt
cacatgctgaggactgctccccctttgcgtcaagattcaagctgttataccccgcgttct
gtaaagacagaagtagagggagaaactggcactgcatcagggttctatgttcctagaaag
gcattggacgcattggaggagctcaaaacttacacacaattgaaagatatgttactttcc
aaaagcacaacccgctcgggcagtgagggtggaacttag
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