Nicotiana tomentosiformis: 104110326
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Entry
104110326 CDS
T05025
Name
(RefSeq) retinoblastoma-related protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nto03000
]
104110326
Transcription factors [BR:
nto03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
104110326
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
104110326
NCBI-ProteinID:
XP_009618086
LinkDB
All DBs
Position
9:23460630..23467301
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AA seq
1002 aa
AA seq
DB search
MVELNNCSNSEENGCVDSLEVRFTDFCKNGLSMGESFVTEATKLFNDSKHLLLSNNSTIG
VITQEGVERYWFVFVLYSVKRLSEKEVGNSSNGNEGNAFSLCQILRGAKLNVVDFFKELP
QFILKVGPTLSNLYGSDWEKRLEAKELQTNFVHLSLLSKYYKRAYQELFLASGNNEDKPS
ATSSSAIHLPQYYRFGWLLFLSLRIHVFSRFKDLVTCTNGLVSVLAILIIHVPVRFRNFN
INDSSRFVKKGDKVDLLASLGKIYQTSIDDLRETMDKVNYLITEKLKKKPCLASEFRTEN
LDNLDTDGLTYFEDLMEESCLPSSVSILEKDYSDAIQNKGELDERIFVNEEDSLLGSGSL
SGGVVNMNGVKRKFDAMASPAKTVTSTLSPYRSPNCANSKMTVATPVSTAMTTARWLRTV
IAPLQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQSTSLM
DNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELVLAT
HKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKG
SSMYNSLAVAKPSLAAEINRTGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNNLAPNG
QIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALQSAFASPTRPNP
GGGGETCAETAINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFF
NRHIDQIILCSFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTG
ADHVDIITFYNEMFIPSVKPLLVELAPAGNAEKNNRNDGQGPASPKPSPFPKLPDMSPKK
VSAVHNVYVSPLRASKMDALISHSSKSYYACVGESTHAYQSPSKDLDVINNRLNGNRKLR
GALNFDVDAGLVSDSIVANSLYLQNGNCRSPVAHVKTEQPES
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggtggagctgaataattgttctaattctgaagagaatggttgtgttgattctcttgaa
gttcgattcacagatttctgcaagaatggattgtccatgggtgaaagctttgtgactgaa
gcaacaaagctgtttaatgacagtaaacatcttttactgtcaaataactctactattgga
gttataacgcaggagggtgttgaacggtattggtttgtgtttgttctgtactcggtaaag
agattaagtgagaaggaagtgggaaattcgagtaatgggaatgaaggaaatgcattttct
ttgtgccagattttacgaggggctaaactcaatgttgtagacttcttcaaagaacttccg
caatttattctaaaagttggtccaacattaagcaatctgtacggttcagattgggagaag
agacttgaggcaaaggaattgcagaccaacttcgtgcatttgagccttttaagcaagtac
tacaagcgagcgtaccaagaactgtttctggctagtggtaacaacgaagataagccctct
gctacttctagttctgctatccacttgccgcaatattatcgttttggctggttgctattt
ctttcacttcgcatccatgtattcagccgcttcaaggaccttgtgacatgcacaaatggt
ttagtttcggtgctggcaatcttaataatacatgtacctgtccgcttcagaaatttcaac
atcaatgactcctcacggtttgttaagaaaggagacaaagtggacttgcttgcatcatta
ggcaaaatttatcagacctcaatagatgacttaagggagaccatggataaagttaactat
ctaataacagaaaagttgaagaagaaaccttgtttggcctcagaatttaggacggagaac
ctggacaaccttgacacagatggtttaacctattttgaagatttaatggaagaatcatgt
ttaccttccagtgtaagtatactggagaaggattacagtgatgcaatacagaacaagggt
gaattggatgagaggatttttgtcaatgaggaggatagcttgctgggttccggaagcttg
tctggaggtgttgtcaacatgaatggagtcaagaggaaatttgatgcaatggcttcccca
gcaaaaacggttacaagtacactctctccttaccgttctccaaattgtgctaactcaaag
atgacggtagctacacctgtaagcacagcgatgacaactgccaggtggttgcgtactgtc
atagctccgctacagccaaaaccttcagcagagctggagagattcttgtcctcctgtgac
agagatgtaacagctgacgtgatccggagagctcagattattctcgaggctatatttcca
agtagtggtcctgcggaacattgtgcagctggtgggagcctgcaaagtacgagcttaatg
gacaacatatgggcagagcaacgtagatccgaggctttgaagctgtattatagggttctg
cagactatgtgcactgcagaatcccagattttgaatgggaacaatttaacttcgttgcta
acgaatgagaggtttcatagatgtatgcttgcctgttcagctgaactggttcttgccact
cacaaaacagttactatgctgtttcctgctgtcttagagagaacaggaatcacagctttc
gatctcagtaaggtgatagagagcttcatcaggcatgaagaaagtcttcctcgagaactg
agacggcatttgaattcacttgaagaacgactcttggagagcatggtttgggaaaaagga
tcttcaatgtacaactctttggctgtcgcaaaaccatcacttgctgcagaaatcaatcgc
acgggcttgttggctgaaccaatgccatccttggatgcaattgcaatgcacattaacctt
tcgtcaggaagcttaccgccactgccgtctctacacaagaacaacttggcccctaacggt
caaatcggtgatatccggtcgccaaagaaagtgtgttccgaatatcgcagtgttttggtt
gagcgaaattccttcacatcacctgtgaaggatcgatttctggctctcaataatataaaa
tcaaagtttccccctccagctttgcagtctgcattcgcaagcccaactagaccaaaccct
ggtggtggaggggaaacgtgtgctgagacagcaataaatgtattctttggcaagattgta
aagttggctgctgtcagaatcaatggcatgattgaacggctacaactttctcaacaaata
agggagactgtatattgcctttttcagaagattctcagtcagaggacaagtcttttcttc
aaccgacatattgatcagatcatcctttgctctttctacggagttgccaagatttcacaa
cttaacttgaccttcaaagaaattatatgcaactaccgaaagcaacctcagtgcaaacca
caagtctttagaagtgtttttgttgactggacattagcacgccataatgtgagaacaggt
gcagatcatgtcgatatcatcacattctacaatgaaatgtttattccttctgtgaagcca
ttactagttgagcttgcacctgctggaaatgcagaaaagaacaaccgcaatgatggtcaa
ggtccggcatcccccaaaccatctccatttccgaagctccccgacatgtctccgaagaaa
gtatctgcagtacataatgtttacgtctctccacttcgagcatctaagatggatgcctta
atttcccatagctctaaaagctattatgcttgtgtgggagaaagcactcatgcttatcag
agcccttcgaaagatctggatgtaatcaataaccgcttgaatggcaatcggaagcttaga
ggcgctctcaattttgatgttgatgcgggcttggttagcgactctatagttgctaacagc
ctttaccttcaaaatggaaactgcagatcaccggttgcacatgtgaaaactgagcagcct
gagtcttag
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