Nicotiana tomentosiformis: 104110335
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Entry
104110335 CDS
T05025
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X2
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104110335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104110335
Spliceosome [BR:
nto03041
]
Common components
Common spliceosomal components
SR proteins
104110335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
104110335
NCBI-ProteinID:
XP_009618097
LinkDB
All DBs
Position
1:14611481..14618593
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AA seq
252 aa
AA seq
DB search
MSHFGRTGPPDITDTYSLLVLNITFRTTADDLYPLFDKYGKVVDIFIPRDRRTGESRGFA
FVRYKYADEAQKAVDRLDGRVVDGREMAVQFAKYGPNAERIQQGRIIEKVSRIKGSSRSR
SPRRRYRDDHYRDREYRSRSRSVDRYERDRYKRRERDYRRRSRSHSLSPDYDRGRGRGRD
TKHHRRSPFDSASPPRRSLSPYRKESPRRSLSPKKRSPEKRSHIERSPTPRSRSPLGRAM
DSRSPSPHADEE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaagaactggacctccggacatcaccgatacttactctcttctcgtc
ctcaacatcactttccgtaccacagccgatgatctgtatcctcttttcgacaagtacggg
aaggttgtcgatatcttcattccgcgagacagaaggactggtgagtcacgtgggtttgca
tttgttcgttacaagtatgcagatgaagcacagaaggctgtggataggctggatggaaga
gtggttgatgggcgggaaatggccgttcaatttgccaaatatgggccaaatgcagaacga
attcagcaagggaggatcattgagaaggtttcaagaatcaaaggaagctcgagaagcaga
agccctcgtagaagataccgtgatgatcactatagagatagagaatacagaagtaggagc
agaagtgttgatcgatatgagcgtgataggtataagcggagagaacgggattatcgccgt
cgaagtaggagccacagcttaagtccagactatgatcgaggtcgtggcaggggacgtgac
acaaaacaccataggaggagtccatttgacagtgcctccccacctcggcgtagcctcagt
ccttacaggaaagagtcccctcgtagaagcttatcacccaaaaaaagaagccctgagaag
cgcagtcacattgaacgttctccaactcctcgaagccgatcccctcttggtcgagcaatg
gattcacgaagcccttctcctcatgctgatgaggagtaa
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