Nicotiana tomentosiformis: 104110419
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Entry
104110419 CDS
T05025
Name
(RefSeq) chloride channel protein CLC-d
KO
K05016
chloride channel 7
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nto01009
]
104110419
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104110419
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nto04040
]
104110419
Protein phosphatases and associated proteins [BR:
nto01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104110419
Membrane trafficking [BR:
nto04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
104110419
Ion channels [BR:
nto04040
]
Chloride channels
Chloride channel (CLC)
104110419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
104110419
NCBI-ProteinID:
XP_009618208
LinkDB
All DBs
Position
9:41772974..41789222
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AA seq
798 aa
AA seq
DB search
MLSDHFQNGVETAKLMWSRIPATAEEEEETDGGEVGPSSTKGNGSTVESLDYEVVENYAY
REEQAKRGKLYMGYAVVVKWFLALLIGIGTGLAAVFINLSVENFAGWKFSLTFQIIQKSY
FAGCLVYILINLVLVLSSVYIITHFAPAASGSGIPEIKGYLNGIDTHGILLFRTLIGKIF
GSIGSVGGGLALGKEGPLVHIGACIASLLGQGGSTKYHLRSRWLQVFSSERDRRDLVTCG
CAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKDGNCGH
FGAGGFIIWDISGGQEDYSFEELLPMAVIGVIGGLLGALFNQLTLYITHWRRNYLHKKGN
RVKIIEACIISVITSVISFGLPLFRRCTPCPEADANSGIECPQAPGMFGNYVNFYCQNNK
EYNDLATIFFNTQDDAIRNLFSAKTAHEFSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVP
GIMIGSTYGRLVGMFVVSFYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNL
KLLPLIMLVLLISKAVGDAFNEGLYEEQARLRAIPLLESRPKYQMRYVTAKEACGNQKVV
YFPRVVKVADAVSILRSNNHNGFPVVDNARSGETLVIGLILRSHLLVLLQSKVDFQHSPL
PCDSRGDLLPIRHNLSEFVKPVSSKGISLHDIHFTPDDLEMYIDLAPFLNPSPYVVPEDM
SLTKVYNLFRQLGLRHLLVVPRPARVIGMITRKDLILEDNDDPAALELQSTSVRGTQANN
RRIKRNVDAGQPLLDGLL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagatcattttcaaaacggggtggagacggcgaagctgatgtggtcacggatt
ccggcgactgcagaggaggaggaggagacagacggcggcgaggtgggtccatcttcaaca
aagggcaatggaagcactgtggaaagtcttgattatgaagttgttgaaaattatgcttac
agggaagaacaggctaaaagaggaaagctttatatgggatatgctgttgtggtgaaatgg
ttcttggcgttactaattggaattggcacaggacttgctgctgttttcataaatctttct
gttgaaaattttgcgggatggaagttctcattgacatttcaaattattcagaagtcatat
tttgctggatgtctggtgtatattttgatcaacttagttctagtattatcttctgtatat
attatcactcacttcgcaccagcagcgtcaggatcagggattcctgaaataaagggttat
ctaaacggaattgacacacatggtatccttcttttcagaactttgattggaaagattttt
ggaagcataggttcagtgggaggtggtcttgcccttggcaaagaagggccgcttgtacat
attggtgcctgtattgcttctttgcttggacaaggcggatccacaaaatatcacctgcgg
tcaaggtggctccaagtttttagcagtgaacgggatcgtcgtgatttggtgacttgtgga
tgtgcagccggagttgctgctgcttttagagctccagtaggtggggtactatttgcgctt
gaagaggtcacttcttggtggaggagtcaactgatgtggcgggtcttctttacctctgct
attgtagccgttgttgtccgtacagcaatgggatggtgtaaagatggaaactgtggtcat
tttggcgctggaggcttcattatatgggacatctcaggtggtcaagaggactattctttt
gaggagttgttgcctatggcagttattggagttataggaggtcttcttggagcgttgttc
aatcagcttactctctatataacacactggcgtagaaattatttgcacaagaaaggaaat
cgtgttaaaattattgaagcttgtatcatctctgtgataacgtcagtcatttcatttgga
ttgcctctttttagaagatgtactccgtgccctgaagccgatgctaactctggcattgaa
tgtccgcaagcaccgggaatgtttggcaattatgttaatttttactgtcagaacaacaaa
gagtacaatgacctcgcaaccatattcttcaacactcaggatgacgctataagaaattta
ttcagtgccaagacagctcacgaattcagtgctcaaagcctactgacatttttggttatg
ttttacaccttggcagtggtgacctttggaactgcagttccagcaggtcagtttgtgcca
ggtatcatgataggatcaacttatggacgtcttgttggcatgtttgtggttagcttttac
aggaagctgaatattgaagaggggacgtatgctcttctgggtgctgcatcttttcttgga
ggttctatgcgcatgactgtatctctctgtgtcattatggtcgagattacaaataactta
aagctattacctctaataatgctggttcttctcatctcaaaggctgttggtgatgctttt
aatgaaggattatatgaagagcaggctagattaagggcaatcccattacttgaatctaga
ccaaagtatcaaatgcgttatgtgacagcaaaggaggcatgtgggaatcaaaaggttgta
tacttccctcgggtagtgaaggttgcagatgcagtttctatattgaggagcaataaccac
aatggtttccctgttgttgataacgcaagaagcggggagacacttgttattggacttata
ctaagaagtcatttactggtgcttctacaatcaaaagttgattttcagcatagcccttta
ccctgtgattcaagaggtgatctcttgccaatcaggcacaaccttagtgaatttgtgaag
cccgtttctagtaaagggatatctctccatgatatccatttcaccccagatgatctggag
atgtacattgatcttgccccatttttaaacccgtctccctacgtggtcccagaagacatg
tcattaaccaaggtttataatctttttcgtcaactaggactgaggcacttacttgttgtt
ccacgtcctgctcgtgttattggcatgatcactcgaaaagatctgatacttgaggataat
gatgatccggcggccttggagctccaatccactagtgtaagaggtacacaagctaacaat
agaaggatcaagaggaacgtagatgctggacaaccacttcttgatggtcttctttaa
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