Nicotiana tomentosiformis: 104110627
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Entry
104110627 CDS
T05025
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nto01009
]
104110627
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104110627
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nto04040
]
104110627
Protein phosphatases and associated proteins [BR:
nto01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104110627
Membrane trafficking [BR:
nto04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
104110627
Ion channels [BR:
nto04040
]
Chloride channels
Chloride channel (CLC)
104110627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TAT_signal
Motif
Other DBs
NCBI-GeneID:
104110627
NCBI-ProteinID:
XP_009618449
LinkDB
All DBs
Position
1:20882808..20889754
Genome browser
AA seq
782 aa
AA seq
DB search
MEDQGDIENEGGGGGIGVMIMENGKDLERNISAVSESGVRQPLLSSKSRVNNTSQIAIIG
ANVCPIESLDYEIIENDLFKQDWRSRKKVQIFQYIFLKWTLVLLIGLSVGLVGFFLNIAV
ENIAGFKLLLISDLMLQDKYFRGFAAYACCNLVLATCAGILCAFIAPAAAGSGIPEVKAY
LNGIDAHSILAPSTLFVKIFGSALGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLT
WKWLKYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEVASWWRSALLWRTFFSTA
VVAMVLRSFIVFCRSGKCGLFGQGGLIMFDVNSGAPNYNTIDVLAVLLIGVLGGLLGSLY
NYLVDKVLRTYSIINERGPAFKVLLVMTISILSSLCSYCLPWFATCTPCPVGLEDKCPTI
GRSGNYKNFQCPAGHYNDLASLFMNTNDDAIRNLFSSDNSSEFHLSSLFVFFAGVYCLGV
VTYGIAIPSGLFIPVILAGASYGRFVGTVLGSISNLNNGLFALLGAASFLGGTMRMTVSI
CVILLELTDDLLMLPLVMLVLLVSKTVADCFNKGVYDQIVKMKGLPYLEAHAEPYMRQLV
AGDVCSGPLITFSGVEKVGNIIHALKFTRHNGFPVIDAPPFSDAPEFCGLALRSHLLVLL
KGKKFTKLSVLSGSSILRSFHAFDFAKPGSGKGPKLEDLSFTDEEMEMYVDLHPVTNTSP
YTVVETMSLAKAAILFRQLGLRHLCVVPKKTTGRDPIVGILTRHDFMPEHIKGLYPHLVH
HK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcaaggtgatatagagaatgaaggaggaggaggaggaattggggtgatgata
atggaaaatggcaaagatttggagaggaatatttcagcggtttctgagagcggtgttaga
cagccattgcttagttctaaaagcagagtcaataatacctcacaaattgctattatagga
gccaatgtttgccccattgaaagtcttgattatgagattattgaaaatgaccttttcaag
caagattggagatctaggaaaaaggttcagatatttcaatatatattcctaaagtggaca
cttgtgcttcttattggattgagtgtagggcttgttggtttcttcttaaacatagcagtg
gaaaatattgctggcttcaagcttctgctcattagtgacttaatgcttcaggacaagtat
ttccgtggatttgctgcttatgcgtgttgcaatttggttcttgcgacttgtgctggaatc
ctatgtgcatttattgcaccagcagctgcagggtcaggaatacctgaagtgaaagcatat
ctcaatggtatcgatgctcattccattttagctccaagtactttgtttgtgaagatattt
ggttctgctttgggtgtttctgctggattcgttgttgggaaggaaggacccatggtccat
actggcgcttgcatagcaaacttacttggacagggcggctcccgcaagtatcatctgact
tggaagtggctgaagtatttcaaaaatgaccgtgaccgtagagatttgattacttgtggt
gctgcagctggtgttgcagctgctttccgagccccagtcggcggtgttctttttgctctt
gaagaagtagcctcatggtggcgaagtgctcttctttggaggaccttcttctcgactgct
gtagtagctatggtgctcagatctttcattgtattctgtcggagcgggaaatgtggacta
tttggtcaaggaggtttgataatgtttgatgtgaattcaggagcacctaattataacact
atagatgtactggcagtgttgttaattggagttcttggaggccttcttggaagcctttat
aattatcttgtggacaaggtcctccggacttacagcatcattaatgagaggggtcctgct
ttcaaagtcttgctcgtaatgaccatttcaatcctgagttctctttgctcgtattgtcta
ccgtggtttgcaacttgcacaccatgtcctgtaggcttggaggacaagtgccctactata
ggtcgctctggaaactataagaatttccaatgtccagctgggcattacaatgatctagcc
tccctgtttatgaataccaatgacgacgccatccgcaatttgtttagctcagataattcc
agcgaattccacctctcttcactttttgtcttctttgctggggtatattgccttggcgtc
gttacctatggaattgctattccctctgggctgttcattcccgtcatacttgctggtgct
tcctatggacgttttgttgggactgtcttgggttcgatatccaatcttaataacggtctc
tttgctctccttggtgctgcctccttcctcgggggtactatgaggatgactgtatccatc
tgtgtcatactacttgagctcaccgatgacctgctaatgcttccattggtgatgcttgtg
ctccttgtttcaaagactgtggccgactgttttaacaagggtgtctacgaccagattgtg
aaaatgaaaggcttgccttatttggaagcacatgccgaaccatacatgaggcaattagtt
gcaggagatgtttgttcagggcctttaattacattctcaggtgttgagaaggtagggaac
ataatacatgctttgaagtttactagacacaacggatttcccgtgattgatgcaccgcca
ttctcagacgcaccagagttctgtggacttgctctaaggtcgcacctacttgttttgctc
aaaggaaagaaattcacgaaactaagtgtattgagcggctccagtattttgaggagtttt
catgcgtttgatttcgctaagccaggatcagggaaggggcctaagctcgaggatttgtcc
ttcactgatgaggagatggaaatgtatgtagatctccatcctgtcacaaatacatctcca
tacacagtagtggaaaccatgtctctggccaaagctgcaatcctttttcgacaacttggt
cttagacacttgtgtgttgtaccaaaaaagactaccgggagggatccaatcgttggaatt
ttgacaaggcatgactttatgccagagcatataaagggactgtacccacatttggtccat
cacaagtag
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