Nicotiana tomentosiformis: 104110727
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Entry
104110727 CDS
T05025
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X2
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104110727
Membrane trafficking [BR:
nto04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104110727
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
104110727
NCBI-ProteinID:
XP_009618559
LinkDB
All DBs
Position
12:31944276..32000962
Genome browser
AA seq
1836 aa
AA seq
DB search
METSSSGYRFRRIPRHSFAGSVNLDPLLDENLEQWPHLNELVQCYRTDWVKDENKYGHYE
SVSPASFQNQIYEGPDTDIETEMHLANARRPKIEDSIDDEIPSTSGTQLSEANFSDLSNA
KVSKHFGESPLPTYEPVFDWENERSLIFGQRIPEAHMSQYTSGLKIAVKVLSLSFQAELV
EPFYGTICLYNRERREKLSEDFIFHILPTEMQEASSSCERRCIFHLDAPSASICLLIQLE
KPATEEGGVSPSVYSRKEPVHLTEREKQKLQVWSRIMPYKESFAWAIIPLFDSNITSVAG
SASPSSPLAPSVSASSSQEGITDPVSKITADGKLGYSNGNSIVVEVSNLNKVKEGYTEES
LQDPKRKVHKPVKGVLKLEIEKLPASSAEVENTLESGSLTYDSLDHGDHLTDSASMKRPT
NGSFSKSKSFEMKELVRNGSIAHENVENTADDFEAFDFRTTTRNEPFLQLFHCLYAYPLT
VSMSRKRNMFIRVELRKDDTDIRKPPLEAMHPREPGVPLQKWSHTQVAVGARVASYHDEI
KISLPAIWTPLHHLLFTFYHVDLQTKLEAPKPVVIGYASLPLSTHAQFRSEISLPIMKEL
VPHYLQDSAKERLDYLEDGKNIFKLRLRLCSSLYPVSERIRDFFLEYDRHTLRTSPPWGS
ELLEAINSLKNVDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVD
EAERNAFLVNFVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWF
FLELIVKSMALEQARSFYHNLPSGEDVPPMQLKEGVFRCVVQLYDCLLTEVHERCKKGLS
LAKHLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQTVLHDCKLTFLQIICDHDL
FVEMPGRDPSDRNYLSSILIQEIFLTWDHDDLSMRAKAARILVVLMCKHEFDIRYQKQED
KLYIAQLYFPLVGQILDEMPVFYNLSTIEKREVLIIFLQIVRNLDDDSLVKAWEQSIART
RLFFKLFEECLMHFEHRKPADGMLVGSSSRNVMGDGPASPKYSDRLSPAINHYMSEAARQ
EVRGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASALALRESLHPILRQKLE
LWEENLSAAVSLQVLEVSEKFSRTAATKRIATDYGKLDCITSIFMNVFSRNQPLSFWKAL
FPVFNSVFELHGATLMARENDRFLKQIAFQILRLAVFRNDNIRKRAVIGLQLLIRSSFSC
YMQTGRLRVMLTITLSELMSEVQVTQMKPDGTLEESGEARRLRNSLDEMADEAKSSSLLL
ESGLPESALVAVPEGSTENRWSWSEVKVLSDSLLMALDASLEHALLGSVMNVDRYAAAES
FYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVSRNDGVWSK
DHVTALRKICPMVSSEITSEASAAEVEGYGSSKLTVDSAVKYLQLANKLFSQAELFHFCA
SILELVIPVYKSRKAYGQLAKCHTMLTNIYESILEQESSPIPFTDATYYRVGFYGEKFGK
LDRKEYVYREPRDVRLGDIMEKLSHIYESRMDGTTLHVIPDSRQVKADELQTGVCYLQIT
AVDPVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVL
QTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQS
LQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHF
RLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttcatctagtggatatcggtttcggagaataccacgccactcctttgctggt
tctgtgaatttagatcccctgcttgatgaaaatttggagcagtggccacatttaaacgaa
cttgtgcaatgctacagaaccgactgggtaaaagatgagaacaagtatggtcactatgaa
agcgtcagcccagcttcatttcagaatcagatatatgagggtcctgatactgatattgaa
acagagatgcatcttgcaaatgctaggcgacctaagattgaggattcaattgatgatgaa
atccccagcacttctgggacacaactctctgaagctaatttctctgacctctcaaatgcc
aaagtctctaagcattttggtgaatcccccctaccgacttatgaaccagtttttgactgg
gaaaatgaaaggtcactaatatttgggcaaaggattccagaagctcatatgtcccagtat
acgagtggtctgaagattgccgtgaaagtcctatcattgtcatttcaagctgaacttgtt
gagccgttttatggcacaatttgtttatataatagggagcgaagagaaaaactttcagag
gattttattttccatatattgcctactgaaatgcaagaagcaagcagttcctgtgaacgg
cgttgtatttttcatcttgatgctccatcagcatctatttgtctgctaatccaactagaa
aagcctgcaactgaagaaggtggagtgtctccttctgtttattcacgaaaggaaccagtt
catctgacagagagagagaaacagaagctacaagtgtggtcgcggatcatgccttataag
gagtcctttgcctgggccatcattccactctttgacagtaacattacttctgttgctggc
tctgcttctcccagcagtcctcttgctccaagcgtttcagcttcaagttctcaagagggt
atcactgacccagtttcaaaaattacagctgatggaaagcttggttattcaaatgggaac
tctattgtggttgaagtgtcaaacttaaataaagtcaaagaaggatacaccgaggaatca
ctccaggatccaaagcgaaaggttcataaacccgtaaaaggtgtcttgaaattggaaatc
gaaaagctgccagctagctctgctgaagttgaaaatactttggagagtgggagtctgact
tatgattctcttgatcatggagaccatttgactgattcggcttctatgaaacgccctact
aatggttccttttctaagtctaaatcctttgagatgaaagagcttgttcggaatggttca
attgctcacgaaaatgtggaaaatactgctgatgattttgaagcttttgacttccgcacg
acgacaagaaatgaacctttcttgcagctctttcactgcttatatgcctaccccttgact
gttagtatgagtcggaaaagaaacatgtttatacgtgttgaactgagaaaagacgacaca
gacattcggaaaccacctctagaggctatgcatccaagggaaccaggtgtaccacttcag
aaatggtcacacacacaagttgctgttggggcaagggttgccagctaccatgacgagatc
aaaatttctttgcctgctatttggacaccattgcatcaccttttgtttactttctatcat
gttgatcttcaaacaaaacttgaagccccaaagccggtggtaattggatacgcttcactt
ccattgtccacacatgcgcagttcagatctgagatttccttgccaatcatgaaagaatta
gttcctcattatcttcaagatagtgccaaggagaggctggattacttggaagatggcaag
aatatattcaagcttcgtttacgactatgttcatcattgtacccagttagtgaacgcatt
agggattttttccttgagtatgataggcacactcttcggacaagccccccttggggatct
gagcttcttgaggcaatcaatagcttgaagaatgttgattccactgctttgcttcaattt
ctttatccgatcttaaacatgcttctccatcttattggcaacgggggagaaactcttcag
gttgctgcatttagagcaatggttaacattttaacaagggtgcagcaggagtctgttgat
gaagctgagagaaatgctttcctagtaaactttgttgattatgcttttgatgattttggg
ggccgtcagccaccagtctatcctggtttgtccacagtgtggggaagtttggctcgcagt
aaggcaaaagggtaccgcgttgggccagtctatgatgatgtcctggcaatggcttggttt
tttcttgagctgattgtcaagtcaatggcactggagcaggctcgatccttctatcacaat
cttccatcgggtgaagatgtcccgccaatgcagttgaaagaaggtgtttttagatgtgtt
gttcaattgtatgattgccttctaacagaagttcatgaacgctgcaagaaaggtctaagc
ttggccaagcatttaaacagtagtttggctttcttttgttatgatcttttatccatcatc
gagcctcggcaggtttttgaactggtgtccttgtacctcgataaattctctggagtgtgt
cagacggtgctgcatgactgcaagcttacttttctacaaattatatgcgatcatgatctt
tttgttgaaatgcccggacgagatccttctgataggaattatctttcgtctatcttaatt
caagagattttccttacatgggatcatgatgacttatcgatgagggcaaaagctgcaaga
atcctggtggtcctcatgtgtaagcacgagtttgatattcgttaccaaaagcaagaggat
aaactatatattgctcaattatattttccccttgttggccagatcctagatgagatgcct
gtcttctacaatctgagtacaattgaaaaacgtgaagtcctgattatctttctgcaaata
gtacgcaacttggatgatgactcacttgttaaagcttgggagcagagcattgcacggacc
agattatttttcaaactctttgaagagtgcttgatgcattttgagcataggaaacctgct
gatggcatgcttgttggtagtagttctcgtaatgtgatgggggatggacctgcatcccca
aaatattctgacagactttcacctgcaataaatcattatatgtctgaggcagcgcggcaa
gaagtcagaggaactccggataatggttatttgtggcagagggtcaactcccaattaagc
tcacctagtcagccatattctttgagagaagcgctagctcaagcccaatcttccagaatt
ggagcatcagcgctagcattaagggaatctttgcacccaatcttaaggcaaaagctggaa
ctttgggaagaaaacctgagtgctgctgttagtcttcaagttttagaagtttccgagaag
ttctcgcggactgctgcaacgaagcgcattgctactgattatggaaaacttgactgtatc
acatctatatttatgaatgtgttctcacgtaatcaaccactctccttctggaaagctctc
tttcctgtcttcaacagtgtctttgaacttcatggagctacactgatggcaagagaaaat
gatcgcttcttaaagcaaattgctttccaaattcttcggcttgcagtttttcggaatgac
aatatcaggaaaagggctgtaattggcctgcagttacttattcggagctcgttttcttgt
tatatgcagacgggaagattaagagtcatgctaaccattacattgtcagagttaatgtct
gaagttcaagtaacacaaatgaaacctgatggcacactagaagaaagtggtgaagctcgt
cgtcttcgaaattctttggatgaaatggcagatgaagctaagagttcttccttattatta
gagtctgggctccctgaaagtgcactggttgctgttccggaaggatcgacagaaaaccgc
tggtcctggtccgaggttaaagttctttctgacagtcttcttatggctcttgatgccagc
ctggaacatgcacttctgggctctgttatgaatgtcgataggtatgcagctgcagagagc
ttttataaactagcaatggcatttgctcctgtaccagatcttcacataatgtggttactg
catctttgtgatgctcatcaggaaatgcagtcttgggctgaagctgctcagtgcgctgtt
gctgttgctggtgtagtgatgcaggcccttgtgagtagaaatgatggtgtctggagcaag
gatcatgtgactgcattacgcaaaatatgccccatggtcagcagtgagatcacttctgag
gcctcagcagctgaggtggagggatatggttcttcaaaactcacagttgactcggctgta
aagtatttacagcttgcaaataagcttttctctcaggctgagttattccatttctgtgca
agcattctagaacttgtaattccagtatataaaagcagaaaggcatatggacagcttgcg
aaatgccacacaatgcttactaatatctatgaatccatccttgagcaggaatcaagccct
atacctttcacagatgccacatattatagagtaggattttacggtgagaagtttgggaag
ttggataggaaagaatatgtttatagagagcctcgtgatgtgcgattaggtgatataatg
gagaaattgagccatatctacgagtcgagaatggacggaactacattacatgtaattcct
gattctagacaagtcaaagcagatgagttgcagactggagtctgctacctacaaataact
gcagtcgatccagtcatggaggatgaagatttaggaagcagaagggaaagaatattctct
ctctctacgggaagtgtccgtgctcgagtctttgatcggtttttgtttgatacccctttt
actaaaaatggaaagacccaaggaggcttggaagaccaatggaagcggcgaacagttctg
caaactgagggatcttttccagcgctagtgaaccgactcttggttatcaaatcagaatct
cttgagttctccccggttgagaacgctattggaatgatcgaaactaggacagctgcatta
aggaacgaacttgaagagcctcgaagttcagaaggcgatcaacttccccgtttgcagagc
ttacagaggattcttcaaggttcagttgcagttcaagttaatagtggagtcctcagcgtc
tgcacagctttcctttctggtgaacctgcaactaggttacgttcgcaggagctacaacaa
cttattgctgctcttcttgaatttatggctgtgtgcaaacgtgctattcgggtacacttt
aggttgatcggggaagaagatcaggattttcatactcagcttgtaaatgggttccagtct
ctcactgcagaactatcacattatattcctgcaattctttcagagctgtag
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integrated database retrieval system
