Nicotiana tomentosiformis: 104111078
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Entry
104111078 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K10895
fanconi anemia group I protein
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104111078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nto03400
]
104111078
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
104111078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
BUD22
Motif
Other DBs
NCBI-GeneID:
104111078
NCBI-ProteinID:
XP_009618975
LinkDB
All DBs
Position
9:complement(30068604..30075640)
Genome browser
AA seq
1437 aa
AA seq
DB search
MTSAATKNPSAVRHHQPPPPPSLTDVDIVQLAQLYHPQSSTPLPQFLLSDDSHQTLVSYL
HSRASSPNPSLAVSEYLSALLSLTQLHASLSPLVPLLLSSYISLFTSHKILHDKSSLSIF
QLFVSHIETVQVHELTTIVDLIISYLPQIIDSEDTHVLTILAKCIELIRFSNDVDKPLEY
VDKVFDKILSCDWSKVLLLKLVEIVKDLNFIEKGKRREFLERVFSGMRNVDLQDLPGLVY
QLLILGSKGFGKKEVVEGIVMYFGGVKSGGSIMRQVEGTVLLHVNFAVKQDPSLGQEVLG
LVRSDYRVFNHFTVAILLSVARVKRLADSSIAVLKTSLFAAYKDLKFARSCKWLSSDLKE
HYLHTARNMEKAVLRAVSESNCGREHVVPSTVQLGFVLLEGIEEGTKKYEKSDDMIGPDE
LGTQVLKSLFEVHDMARNEIIEQCKLRILSLKPEQSFPVIRLLGCLICTYPYPMLEHISH
LKELLDYFTFMNEKVSSHLVAALLPLIRSSRDLQDYTILVLRKAMFRREDSIRLAATSSI
VNLILAEKQSKKDGPFSCQDSSSQASSSQQAEVYRALGSSLFQELNGLLQRCLYQQAKVR
EILYHGLLKLVLVDPLTSGAVFDFLFPHFLRFYREDADVLLDINQCTNSESGKVYIQEPL
DCLLSCISWMLLLQPHGKTDHPSDSWTCFGFSLTQENEQPGKAWSKESLSNALSKIRDFL
RNADMEGLLGKNQDTGSTPLEEEKRRCCSSILLGIIEVMLNVVGTEFGKTTDVKKFELEK
ELFDFIGIFESLDRNICRQGGGSTQRGFIRPTASTTSEELEFSGSKLCQERIPLLATSII
YQLLQNTIESWRYDGFNNNVASQKHSQLSSGKAPTQYYKILSFTLNLCLRQLKASSVVRQ
QDPLKMLIYGEIKQLGSPLLKMIWWLLSEPKSMTDSRKKDANVKKDLDDRKEYIHSALLS
LKELLALILHELDYSVLIDDLAAVSGPGDEVGNAMDGDIDTECEKADDILYKYTSEELFI
KNSIRPLISMLLARSFFREVEVLCDIIMLISNKLPEEQRNLVGNWAKCICKTSKISNPKA
AKSIVSIAMLLTSPPSDLIIAEDMAAELLKVVGSESEKFDSQVTLDAYSIINKSTSAAVA
SLILHLVESVILDTEWVIRKLKIYSVANTRAVLVNQNGERDPGLALEEIVYSRAEAVVKV
LSSFVMMDLKDPQAEQLVKLAARFYKNLAQMSKLLIASKGVKQPLPSLKYQKLVEVTCSQ
LTAPLYNFMVVMQKKQLESTKSKALVNKIKRENRCIPDLIYQIEDYEKYLIQISKATKIN
LLRHAKRSTSRDFKIIEPQSFSVEEGAGSQDAEDNDAARGENEEDPRDEEGNGAEDESVV
GAEDDDEGNEVEDALMAAYNSPPAVEASESENEAEADLPKAKRAKMTRVVEDSDEEA
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgccgcaaccaaaaacccctccgccgtccgccaccatcaaccaccaccgcca
ccatcattgaccgacgtagacatagttcaattagctcaactatatcacccccaatcctcc
actccactcccccaatttctcctctccgatgactctcaccagacccttgtatcctatctc
cactcacgcgcctcttctccgaacccctcactcgctgtctccgaatacctctcagctctc
ctctcccttacacaactccacgcttcactttccccactcgtccctcttcttctttcttcc
tatatttcccttttcacttcccataaaatcctccacgataaatcctctctctccattttc
caacttttcgtgtcccatatcgaaacagtccaagtccatgaattaacgacaatagtagat
ttgattatatcttatttacctcagattattgattctgaggatactcatgtattaactata
cttgctaaatgtatagagctgattaggttttcaaatgatgttgataagcctttggaatat
gtcgataaggtgtttgataaaattcttagctgtgattggagtaaggttttgttgttaaaa
ttggtagaaattgtgaaggatttgaatttcattgagaaggggaagaggagggaatttttg
gagcgggtgtttagtggaatgaggaacgtggacttgcaggatttgcccgggttggtgtat
caattgttgatattgggatcaaagggttttggtaagaaggaagtcgtcgaagggattgtg
atgtattttggtggggtgaagtcaggtggttcaataatgaggcaagttgaagggactgtg
ttgcttcatgtgaattttgctgttaagcaggatccttctttaggacaagaggtgttaggg
ttagtgaggtccgattatcgggtgtttaatcattttactgttgcaatattgttgtcagtt
gctagagttaagaggctcgctgacagctccattgcggttctgaaaacatcactgtttgct
gcgtataaagacttgaaatttgccaggagctgtaaatggctatcatctgacttgaaggaa
cactatttgcatactgccagaaacatggagaaggctgtgctaagagctgttagtgagagc
aactgcggaagagaacacgtggtgccaagtaccgtacaacttggatttgtgttgcttgaa
ggaatcgaagaaggaactaaaaaatatgaaaagtctgatgatatgataggtcctgacgag
ctaggtactcaggttctcaagagtctatttgaggttcatgatatggcaagaaatgagata
atagagcaatgcaaattacgtatcctctctttgaagcctgaacaaagctttcctgtaata
agactgcttggttgtcttatctgtacttatccatacccaatgttggagcacatttcacat
ctgaaggaactgttggattatttcacattcatgaatgaaaaggtctcctctcatcttgtt
gctgcccttttgcctctaatcagatcaagccgtgatcttcaggattataccatcttggtc
ttgcgtaaggcaatgtttagacgagaagactcgattcgtcttgctgcaacaagttcaatt
gtcaatttgatattggctgaaaaacaatcaaagaaagatggaccattttcgtgtcaagac
tcaagcagtcaagcgagtagcagccagcaagctgaagtttaccgtgcacttggatctagt
cttttccaggagctaaatggtttgttgcagaggtgcctttatcagcaggcaaaggtcaga
gagattctatatcatggacttcttaagcttgttttggtggatcctttaacttctggagct
gtttttgattttctcttcccccatttcttgcgattttacagagaggatgcagatgttcta
ctggatattaaccaatgtactaattcagagagtgggaaagtgtatattcaagagccacta
gactgccttctctcctgtatctcctggatgcttcttcttcagccacatgggaaaactgac
catccttcagattcatggacttgctttggcttctctctgacacaagaaaatgagcagcct
ggaaaagcgtggtccaaagagtcactgtccaatgcgttatcaaagattcgggacttccta
agaaatgcagatatggaaggcttacttggcaaaaatcaggatacaggctctactccttta
gaagaggaaaaacggagatgctgttcttcaattttattaggaatcattgaggtgatgttg
aatgtagtagggactgagtttggaaaaacaactgatgtgaaaaagtttgagttggaaaaa
gagctgtttgacttcattggtatttttgaatctctggaccgaaatatatgtagacagggt
ggtggttcaactcaaagaggttttatacggcctactgcaagcactacttcagaagagctt
gaatttagtggcagtaaattatgtcaggaacgaattcctctcttagcaacttcaattatc
tatcagctgttgcaaaacactatagaatcatggagatatgatggctttaacaacaatgtg
gcctctcaaaagcatagccaattatcatctggaaaggcaccaactcagtattataaaatt
ctttcgtttactcttaacctttgcctccgtcagctaaaagcatcctctgttgtgcgacag
caagatcctctaaaaatgttgatctatggggagatcaagcagttgggctcccctttgctg
aaaatgatttggtggctcctctctgaaccaaaatctatgacagatagtaggaaaaaagat
gctaatgtgaagaaagatcttgatgacaggaaggaatatatccattcggcacttctttcc
ttgaaagaattgctggcattaatcttgcatgagttggattattctgttctgatagatgac
ctggctgcagtttctggtcctggggatgaagtgggcaatgctatggatggcgatattgat
accgaatgtgaaaaagctgatgacattctttacaaatatacaagtgaagaattattcatc
aaaaacagtataaggccactgatttctatgcttcttgcacgttctttcttccgtgaagtt
gaggttctttgtgatattatcatgttaattagcaataaactgccagaggagcaaaggaat
cttgttggtaattgggctaaatgcatctgcaagaccagtaaaatatcaaatcccaaggct
gctaaaagtattgtatctattgctatgttgttgacatcaccaccaagtgacttaattatt
gctgaagacatggctgcagagcttctgaaagtggtgggatcagaatcagagaagtttgat
tcacaagtgacattggacgcgtattcaattataaacaaatcaaccagtgctgcagtagct
tcactaatactgcacttagttgaatcagttattctcgacactgaatgggtcataaggaaa
ttgaagatatattctgttgcaaatacaagagctgttttagttaatcagaatggtgaaaga
gatccaggattggcgctggaagagattgtttattcaagagcagaagcagttgtaaaggtg
ttatcttcttttgtgatgatggaccttaaggatcctcaggcagagcagttggtgaagtta
gctgcaaggttttacaagaacttagcccaaatgtcaaagcttctaattgcttccaaaggt
gtgaaacaacctttaccaagcctcaagtatcaaaagcttgtggaagtaacttgtagccag
ctaacagctccactctacaattttatggtagtgatgcaaaagaaacaactggagagcacg
aaatctaaagcactcgtcaataaaatcaaaagggagaacagatgcatccccgacttgatt
taccaaatagaagattatgagaaatatctcatacaaattagcaaggctacaaaaataaat
ttgctgaggcatgcaaaacgaagcacctccagggacttcaagataatagagccacaaagt
ttttccgtagaggaaggtgctggaagccaagatgcagaagataatgatgcagcacgaggt
gagaatgaagaagaccctcgtgatgaagaaggaaatggagcagaagacgaatcagtggtt
ggagctgaagatgatgatgaaggaaatgaagtggaagatgcattaatggctgcatacaat
agtccaccagcagtagaggcttctgagtccgaaaatgaagctgaagctgatcttcctaag
gcaaagagagcaaaaatgacgagggttgttgaggactcggatgaagaagcataa
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