Nicotiana tomentosiformis: 104111326
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Entry
104111326 CDS
T05025
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00100
Steroid biosynthesis
nto00909
Sesquiterpenoid and triterpenoid biosynthesis
nto01100
Metabolic pathways
nto01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104111326
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
104111326
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nto01006
]
104111326
Enzymes [BR:
nto01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104111326
Prenyltransferases [BR:
nto01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104111326
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
PhoU_div
Pox_EPC_I2-L1
Motif
Other DBs
NCBI-GeneID:
104111326
NCBI-ProteinID:
XP_070052843
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Position
3:16052686..16077592
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AA seq
406 aa
AA seq
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MGIIGDIVRHPNEICPLMKLLLIAKLAEKQILSKPHWSFCYLMLRNISRSFSLVIQQLPL
ELRDAVCVFYLVLRALDTVEDDTSIATEVKVPILIAFHRHIYDHEWHFSCGTNAYKDLMD
HFHHVSTAFLELGKNYQEVIEDITMRMGGGMAKFINKEIETIDDYEEYCHYVAGLAGLGL
SKLFHASGKEDLAPDSLPNAVGLFLQKTNIIRDYLEDINEVPKCRMFWPRQIWSKYVNKL
EDLKFEENSVKAVQCLNDMITNALSHVEDCLVCLSTLRDPAILRSCAIPQIMAVGTLTMC
YNNAEVFRGAVKMRRGLSAKVFDQTRTMEDVYGAFFHFSSILKSKVDNNDPNATNTLKRI
ESIMKTCRDYSGTLSKRNKPNYIPTLIIIFFIVVAILLAYLSAKRP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgggcataataggagatattgtgaggcatccaaatgagatatgcccattgatgaagctg
ttgctaatagcaaaattagcagagaaacaaattctttcaaagccacactggagcttttgc
tatctcatgctccgcaacatctctcgcagcttctctcttgtcattcaacagcttcccctt
gagcttcgagacgctgtatgtgtattctatttggttcttcgcgcacttgacactgttgag
gatgataccagcatagccacagaggttaaagtacctattctgatagcttttcatcgacac
atatatgatcatgaatggcatttttcatgtggtacaaatgcctacaaggatctcatggac
catttccatcatgtttcgactgcttttctggaacttgggaaaaactatcaggaggtgatt
gaggatattactatgaggatgggtggaggaatggctaaattcataaacaaggagattgaa
acaattgatgattacgaggagtattgtcattatgtagctgggcttgcaggattaggcttg
tcaaaacttttccatgcctctggtaaagaagatttagctccagattctctccccaatgct
gtgggcttatttcttcagaaaacaaatatcattagagattatttggaggacataaatgaa
gtacccaagtgtcgtatgttttggcctcgtcaaatttggagtaaatatgttaacaaactt
gaggacttgaagttcgaagagaactcggtcaaggcagtacaatgtctcaatgacatgatc
actaatgctttatcacacgtggaagattgtctagtttgcctatccacattacgcgatcca
gctatccttcgatcctgtgctattccacagatcatggctgtcggaacattgacaatgtgc
tacaacaacgctgaagtcttcagaggtgctgtaaaaatgagacgaggtctcagtgccaag
gtttttgaccaaaccaggacaatggaagatgtatatggtgcttttttccatttttcttct
atactgaaatccaaggttgacaataacgatccaaatgcgacaaatactttgaagcggatt
gaatcaatcatgaaaacttgcagagactactctggaaccttgtctaaaaggaacaaacct
aattacataccaactttgattattatctttttcatcgtagtggctattcttcttgcttac
ctgtctgcaaaaagaccctag
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