Nicotiana tomentosiformis: 104111806
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Entry
104111806 CDS
T05025
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Module
nto_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104111806
Enzymes [BR:
nto01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104111806
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Peptidase_C32
Motif
Other DBs
NCBI-GeneID:
104111806
NCBI-ProteinID:
XP_009619865
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Position
3:complement(130427787..130431287)
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AA seq
411 aa
AA seq
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MVLLLAGTTMVYLGIFLVLLCMFSPVWSADDIKTFNVVNFGAVGDGRTDDLPAFLKAWET
VCQSESSRVILVIPEKKKFLLTPSTFEGPCKPSFIHIQVSGNIIAPNSKSGWDGRATNAW
LIFENIDHLTVNGNGVFDGQGHVWWSNPCLDDNNPSQETQCKGPTALIFRRCDRLRVWGV
TLIRSARSHIILTACNEVSIANIRIMSPGDSPNTDGIDVSASTNVRIHNSLIATGDDCIA
IGGGSSNVNISGITCGPGHGISIGSLGEGGFEIVEDVRVRNCTIKDTLTGVRIKTWQGGK
GYARRITFEGIKLVAVNNPIIIDQFYCPSRVNCKNDTAAVALSDIAFRGISGTSLMDEVI
NLSCSETVGCKNILVDHVYISSVKGNPVHAKCVNAHGRHTHTRPVVNCLLP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggttcttttactagctggtactacaatggtttacttgggaattttcttggttttgttg
tgcatgttttctcctgtatggagtgctgacgacattaaaactttcaatgtcgtgaatttt
ggggcagtcggagacggaagaacggatgatctcccagctttcctcaaggcatgggaaact
gtctgtcaatcggagtcgagtcgtgtaattcttgttataccagaaaaaaagaaattctta
ctgacgccttcaacatttgagggtccttgcaaaccctcttttatccatattcaggtatca
ggaaatataattgcacctaactcaaaatcgggatgggatggacgtgcaaccaatgcatgg
ctcattttcgagaatatcgaccatcttactgttaatggaaatggagtttttgacggccaa
ggccatgtatggtggtctaatccttgcttggatgataacaacccatcccaagaaacacaa
tgcaaaggaccaactgcattgattttcagacgatgcgaccggcttcgagtttggggagta
acgcttattagaagcgctagaagtcatatcatattgactgcttgcaatgaagttagcatc
gctaatattcgtattatgtcccccggtgacagtcccaacaccgatgggatagacgtttcc
gctagcacaaacgtacgaatacacaactctctcattgccacaggcgatgactgtattgca
ataggaggaggatcgtccaatgtcaatataagcggcataacatgcggaccaggccatggt
attagtattggatccttgggagaaggaggatttgaaattgtggaagatgtgcgcgtacga
aattgcacgattaaagacaccttaacaggagtaagaattaagacctggcagggaggcaaa
gggtatgcaaggaggatcacttttgaaggaataaaattggttgcagtcaacaatcccatc
atcatcgaccaattttactgccccagccgagtcaattgcaaaaatgatacagctgcagtt
gcattgagcgacatagcattcagaggaatatcagggacttccctgatggacgaggtgata
aatctgagctgcagcgaaactgttggctgcaaaaacatacttgtcgatcatgtgtatata
tcatctgttaagggtaaccctgttcatgccaagtgcgttaatgctcatggaagacacact
catactaggcctgttgtgaactgtctgctgccatag
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