Nicotiana tomentosiformis: 104112023
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Entry
104112023 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K23288
syndetin
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104112023
Membrane trafficking [BR:
nto04131
]
Protein recycling
Others
EARP complex
104112023
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
104112023
NCBI-ProteinID:
XP_009620140
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Position
11:105973080..105997305
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AA seq
1100 aa
AA seq
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MQSNSSSSSAPPFPLIPLVLLNGGQGQLSEGGFELSRFLFLGSLLFSSQGAGYGDGGMDL
SKVGEKILSSVRSARSLGLLPSSSDRPEVPERAAAAAALARVLAGLPPHQRHALSSSSEE
LSSIYGSKPPGQVVEELEEEFYEEEFDPVGHILEHIPSEDGELAYLEEQAALRLAQLDRI
SERLSRHVMEHHEVMVKGMDLVRQLERDLKIANVICMNGRRHLTSSRNEVSRDLIVSTNS
KRKQALLDVLPVLTELRHALDMQSTLETLVEEGRFSKAFQVLSEYLQILDTLSELSAAQE
MSRGVEVWLGKTLQKLDSLLLGVCQDFKEENYVTVVDAYALIGDVAGLAEKIQSFFMQEV
LSETHSVLKTTVQEDLDNTNVQSTRLTYSDLCIQIPESKFRQCLLATLAVLFRLMCSYHA
IQSFRPEDKDDISSPSIERVPILSSVEDPLPTSAASCDTEMHGSSNINYRVEEARDDGST
ASSSGSPWFQLRKDATTFVSHTLLRGRKNLWQLTTSRAAVLLSSPAIYSASIHQFLITYE
DLNIFVLAGEAFCGSKAVEFRQKVKSVCESYLAAFHRQNIYALKMVLEKENWLILPPETI
EVVSFAGLVGDGAALIVSSETSPNARLPRKSVHPIQTDSKRNGFSSWLKGGNPFLPKLNG
SSKEYLDSYLLNGSATQESGNSNEDSFDKSSLTNSDVNHVNGNASLSEDENEDLHADFID
EDSQLPSRIAKPGHSRNRSSHWNIEQIEAQTGSSLSLLRLLDKYARLIQKLEIVNVEFFK
GFCQLFGIFFHFVFETFGQQSTHPSGKAVTDTLSYRLKTALSRITQDCDQWMKPQSQSFS
SSPPSSSSTSFSHMDVTPTSPPSYLTGASLGLKERCAGADTIYVVARLLHRSKAHLQSML
LQNNGALVEDFYVHLVDAVPDLVDHIHKTTARLLLHINGYVDRIANAKWEVKELGVEHNG
YVDLLLGEFKHYKTRLVHGGIQKEVQDLLLEYGVDNVAEILVEGLSRVKRCTDEGRALMS
LDLQVLINGLKHFISVDVRPKLQIVETFIKAYYLPETEFVHWARAHPEYSKGQIVGLINL
VSTMKGWKRKTRLEVLEKIE
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaactcttcttcttcttctgctccgccttttcctttaattccactggttctt
ttaaatgggggtcaaggtcaattgagcgaaggtgggttcgaattatctaggtttttgttc
ttaggttctttgctcttctcttctcaaggagctggctacggcgacggtggcatggacttg
tctaaagttggtgagaagattttgagttccgttcgctccgccagatctcttggcctcctc
ccttcttcttccgatcgtcctgaggttcctgaacgagctgcagccgctgctgcccttgca
cgtgttctagctggactacctccccatcagagacatgctctgtcatcaagctcagaggaa
ttgagctctatatatgggagcaaacctcctggtcaagttgtcgaggagctggaggaagaa
ttctatgaagaggaatttgatcctgtcggacatattctggagcatattccttctgaagat
ggtgaactagcttacttggaagaacaggctgctcttagattagcacagctggacagaatt
tctgaacgcttgtcgcgccatgttatggagcatcatgaagtaatggtgaagggaatggat
cttgtccgacaactggaaagagacttgaagattgcaaatgtcatatgcatgaatggtcgc
agacatttaacttcttcaaggaatgaggtgtcaagggatcttattgtctccacaaattct
aaaagaaaacaagcactgttggatgtgcttccggttctgactgagctgcgtcatgcactt
gacatgcaatcaactcttgaaactcttgttgaggaaggaagattctcaaaggcgttccaa
gtactatcagagtatttacaaattttggacacactttcggagctttctgccgcacaagag
atgagccgtggtgttgaggtttggctagggaagactcttcaaaagctggattcactttta
ttaggagtgtgccaggatttcaaagaggagaactatgtaactgtagttgacgcttatgcg
cttattggagatgttgctggccttgctgagaagatacagagtttctttatgcaggaggtt
ctatctgaaacccactctgtgctgaagactaccgtacaagaggatctggacaacaccaat
gtgcaaagcactaggctcacatatagtgatctgtgcatccagatacccgaatccaagttc
aggcaatgcttgttagcaacactagctgttctttttaggttgatgtgttcatatcatgca
atacagagcttccggcccgaggataaggatgatatttcgtcaccaagcatagagagagtg
ccaattttatcctctgttgaagacccactacctacttctgctgcttcatgcgacactgaa
atgcacggttcgtccaatataaattatagggttgaagaggcaagggatgacggaagtaca
gcatcaagcagtggatccccctggtttcaactgaggaaagatgccacgacctttgtttca
catacattacttaggggtcgaaagaatctttggcaacttacaacaagtcgtgcagctgta
ttgctttcttcacctgctatttattctgctagcatccatcaattcttaataacttatgaa
gatttaaacatttttgtacttgccggggaagcattttgtgggagtaaagcagttgagttc
aggcagaaagtgaaatctgtttgtgaaagttatctagctgctttccatcggcaaaatatt
tatgctctcaagatggtgctggaaaaggagaattggctgatattgccaccggagacaata
gaagtagtaagctttgctgggcttgttggtgatggagcagctttgatagtttcatctgaa
acttctcccaatgctcgactgccacgcaaatctgtacatcctatacaaactgactctaag
aggaatggattttcaagttggcttaagggtggaaacccatttctgccaaaactaaatggt
agttccaaggaatacttggactcttatttgcttaatggatctgcaacgcaagaaagtgga
aactccaatgaagattcttttgataagagttctttgacaaacagtgacgtaaatcatgtc
aatgggaatgcttctttatctgaagatgaaaatgaagatcttcatgctgattttattgac
gaagatagccaactacctagccggattgctaaacctggtcattcaagaaatcgctcttca
cattggaacattgaacaaatagaagcacaaacaggatcatcacttagcctcctgaggtta
ttggataaatatgcgaggttgattcagaagttagagattgttaatgttgagttttttaag
gggttttgccaattgtttgggatcttctttcactttgtctttgagacctttggtcagcaa
agtactcatcctagtggaaaggctgtgactgacactctgtcgtataggcttaagactgca
ttatcacgaataacacaggattgtgaccaatggatgaaaccccagtctcaatcattttcc
tcctctcctccctccagctcaagcacatcattttctcacatggatgtcactcctaccagc
ccgccaagttacttaactggtgcatccttgggactgaaggaaagatgtgcaggtgctgac
actatatatgtcgttgctcggttattgcatagatctaaagcacatcttcagtcaatgctt
cttcaaaataacggggcacttgttgaggatttctatgtgcatttggtggatgctgtaccg
gaccttgtagatcatattcataaaacaactgctagattacttctccacataaatgggtac
gttgatcggattgccaatgctaaatgggaggtgaaagagcttggagtagagcacaatgga
tatgtagatcttttgcttggagaatttaagcattataaaacaaggcttgttcacggagga
attcagaaggaggttcaagacctcctcttagaatatggagttgataatgttgctgaaatt
ctcgttgaaggcctatctcgcgtgaagaggtgtactgatgaaggacgagctcttatgtca
ttagatcttcaggtattgataaacggcttgaaacatttcatctctgtagatgtgaggcct
aaattacagatagttgaaacattcatcaaggcctactaccttccagaaaccgagtttgtg
cactgggcacgtgctcatccggaatacagtaaaggtcagattgttggtctaatcaaccta
gtctctacaatgaaaggctggaaaaggaaaaccaggttggaagtgttggaaaagattgag
taa
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