Nicotiana tomentosiformis: 104112049
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Entry
104112049 CDS
T05025
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nto01009
]
104112049
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nto04131
]
104112049
Protein phosphatases and associated proteins [BR:
nto01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104112049
Membrane trafficking [BR:
nto04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
104112049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
104112049
NCBI-ProteinID:
XP_070052365
LinkDB
All DBs
Position
2:complement(154655083..154700001)
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AA seq
966 aa
AA seq
DB search
MESNLAPAKAPSIASILNNPHAGKSDGWWWPTSSSLPVVPEFAPLNPLPKPGSDLTRTDF
TPYIASFSDPFARFHDIQTHTKSTLLLDDQNGENALVACLREVPSLYFKEDFQLEDGVTF
KSVTAENLVVQEKLSQYLDVVELHLVREISLRSSSFFEAQGQLEDLNSKIVEGCKRIREL
KETIRLLDTNLVGPARKLQELNVKRSDLVALQNKLNLIIYVNQALSTLNLLVASADCAGA
LDVTDDLQHLLDGDELAGLHCFRHLRDELATSIDSINSLLSAEFMRVTIQEAGNMDAAIT
SKFKARATIAINGEGHEVKLDEEETSNFRDRLLPFVIGLLRTAKLPAVLRIYRDTLTADM
KTAIKTAVEELLRVLCAQPLDSDFVAGERVVDTDGGSSSLASRLRSLPPESFVQLLKAIF
MIVQAHLARASEVKKTIEWIICHLDDHYAADSVAAAIALGAAAAETASEADGQITTFSQF
SPPSNFSRGFSIHEKGNDVTTMSHLSRNFRADILRENTEAVFAACDAAHGRWAKILGVRA
PIHPKLRLQEFLNIYNITQEFITATEKIGGRLGYSIRGTIQSQAKAFVDFQHDSRMAKLK
AILDQENWAEIDVPDEFQTIVTSLFCPKSGTTGHADDDSAVTATSQTEVVQSSSDPSMVD
AGVPNISHNTEQSDSTSTHPDSTAQSNDTNSRESGRSNPRMLSFGGVSYHMVNCGLILVK
MLSEYIDMNNSLTGLSSEVVHRVVDILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALT
SQVISFTYTIIPEIKRILLLKVPETHKGLLMLEVDRVAQDYKVHRDEIHSKLVQIMRERL
LVHLRSLPQIVESWNRQEDTDSQPSQYARSITKEVGLLQRVLSRTLHEVDVQAIFRQVVI
IFHSQISEAFSRLDISSQQARQRTYRDVQHLLGCIRSLPSDSKSNPPNWGQLDEFLAQNF
CAEASQ
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaaacttagctccggcgaaagctccgtcaatagcatccattctcaacaaccca
cacgccggtaaatcagatggatggtggtggcccacttcctcatcccttcccgtcgttcct
gaattcgccccactaaacccacttcctaaacccggatctgatttaacccgaaccgatttc
accccttacattgcctccttttccgatccttttgcccgttttcacgatatccaaacccac
actaaatctaccctcctcctcgacgatcaaaatggcgaaaatgcccttgtagcgtgcctt
cgcgaagtgccgtctttgtacttcaaggaagattttcagttggaggatggcgtcacgttt
aaatccgtgacggctgagaatttggttgtgcaagagaagttgtcgcagtatttggatgta
gtggaattgcacttggtcagggagatttcgttgcgttcgagctcgttttttgaggcgcag
gggcaactggaggatctgaattcaaagatcgtcgaagggtgtaagaggatcagggaattg
aaagagacaataaggctgctggatactaatttggtggggcctgctagaaagttgcaggag
ttgaatgtaaagaggagtgatttggttgctcttcagaacaaactcaacctcattatatac
gttaatcaagctttatcaactctcaatttgcttgttgcatctgcagattgtgctggagct
ttagatgtcacggatgatttgcaacatttattggatggagatgaactggctggtctacat
tgctttcgacaccttcgtgatgaattggccacttcaattgattctatcaacagccttctt
tcagcagagtttatgcgtgtaactatacaagaagctggcaacatggatgcggcaattaca
tcaaaatttaaagcgcgggcaaccattgccattaatggagaaggccatgaagttaaattg
gatgaagaagaaacctcaaatttccgagaccggcttcttccatttgttattggattacta
agaactgcaaaactccctgctgtgttgagaatataccgtgacactcttacagctgatatg
aaaactgccattaagacagcagttgaagagctgcttcgtgttctgtgtgcccaacctttg
gattcagattttgttgcaggcgagcgagtggttgatacagatggtggaagctcatctctt
gcaagtagattaagaagcctgccaccagaaagttttgttcaacttttgaaggctattttc
atgatagtgcaggcccacttagcccgggcttctgaagttaaaaaaacaattgagtggatt
atctgccatcttgatgatcattatgctgccgactcagttgctgctgcaattgcacttggg
gcagcagctgcagaaactgctagtgaagctgatggtcagatcaccaccttttcacaattt
tctcccccaagcaacttttcccggggtttttcaatccacgagaagggcaatgatgtgaca
actatgtcacatttatcgagaaatttcagagctgatatactgagagagaatacagaagct
gtatttgcagcttgtgacgccgctcatggaagatgggccaagatccttggagtacgtgct
cctatccaccctaagttgaggttgcaggagttcctaaacatatataacatcactcaggaa
tttattactgccactgagaagattggtggaaggttggggtatagtatccgtggaaccata
caatcacaggccaaggcatttgttgattttcaacatgattctcgaatggcaaagttgaag
gctatacttgaccaggaaaactgggctgagattgatgtccccgatgagtttcagaccatc
gtcacatcactgttctgtcccaagtctgggaccactggacatgctgatgacgattctgct
gtcactgcaacaagccaaactgaagtggtccaaagcagcagtgatccttccatggtggat
gctggagtcccaaatatatcacataatacggagcagagtgattctacttcaacacaccca
gatagtacagcacagagtaatgacacgaactcaagagaaagcggaagatctaatcctaga
atgctttcctttgggggtgtttcgtatcacatggtaaactgcggcttgattttggtgaag
atgttgtcagaatatattgacatgaataatagtttaaccggcctatcatcagaagtggtt
caccgtgttgttgacatcttgaagtttttcaatacgagaacttgtcaacttgtccttgga
gctggagccatgcaggtttcaggtttgaagtctattacttctaagcacttggctttgaca
agccaagtcatcagtttcacatacactataattcctgaaatcaagaggatacttcttctg
aaagtgccggagacacacaagggattgctaatgctggaggttgatcgagtagcacaggac
tacaaagttcatcgtgatgaaatacattccaagttggtacagataatgcgggaaagattg
ctggtacaccttcggagtttgccacaaattgttgagagttggaataggcaggaagatact
gactcacagccaagtcagtatgctcgttcaatcacaaaggaagtcggccttcttcaacgt
gtgttatctcgaactctgcatgaggtagatgttcaagctattttcaggcaagtggttatt
atctttcactcacaaatttcagaagcattctcacgattggatattagcagtcaacaagct
agacaaagaacgtatcgtgatgttcagcatctgcttggatgtatcagatcattgccttct
gatagtaaatccaatcctcctaattgggggcaacttgatgagtttctggcacaaaatttc
tgtgcggaagcaagtcaatag
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