Nicotiana tomentosiformis: 104112101
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Entry
104112101 CDS
T05025
Name
(RefSeq) KH domain-containing protein At5g56140 isoform X1
KO
K14945
protein quaking
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nto03041
]
104112101
Spliceosome [BR:
nto03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104112101
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
104112101
NCBI-ProteinID:
XP_009620232
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All DBs
Position
7:53838314..53844594
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AA seq
293 aa
AA seq
DB search
MSSGRYMAYSPSPSAPHSPHIGGLRSASSTLADQEKYLSELLAERHKLSPFVPVLPHCYR
LLNQELLRVTTLLGNASVLDQSGLEQASPLASGGMYSNGGANMDRWASPFQSEISGLMHS
PSAQSWLNTQSNSSGLIVKRTLRIDIPVDQYPNLHLQYNFVGRLLGPRGNSLKRVEATTE
CRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHVIVEAELPVEIIDARLLQAHEILEDL
LKPMDESQDFYKKQQLRELAMLNGTLREEGSQMSGSVSPFHNSLGMKRAKTRG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggcaggtacatggcctactcaccatctccctctgctcctcactctcctcac
atcggtggtcttcgctctgcttcctctaccctcgccgaccaagaaaagtatctctcagag
ttacttgcggaacgccataagctcagcccatttgtgcctgtccttcctcattgttatcga
ttgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcttcagttttagat
caaagtgggcttgaacaagctagccccctggcttcaggaggaatgtattcaaatggagga
gctaatatggacagatgggcatcaccatttcaatcagaaatatcaggtttaatgcactca
ccatctgctcaaagctggcttaatactcaaagtaactcatcaggcctcatagtgaagcga
acactcagaattgatatacccgtggaccaatatcctaatttacatttgcagtacaatttt
gtggggcgcctcctgggccctagagggaactctctaaaacgagtggaagctactaccgag
tgccgggttctgataagaggacgcggcagcatcaaggatccaataaaggaagaaatgatg
aggggcaagccggggtatgaacacctgaatgagcctcttcatgttattgtggaggctgaa
ctgccagtggagatcattgatgctcggctattgcaagcacatgagatattggaagatctg
ctcaagcctatggatgagtcccaggatttctataaaaaacagcagctacgtgaacttgct
atgcttaatggtactcttcgtgaagaaggttctcaaatgtctggttctgtttcccccttc
cacaacagtcttgggatgaagagggctaaaaccagggggtga
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