Nicotiana tomentosiformis: 104112204
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Entry
104112204 CDS
T05025
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104112204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nto03009
]
104112204
Ribosome biogenesis [BR:
nto03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104112204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
Beta-prop_ACSF4
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_EMC1_N
WD40_WDHD1_1st
WDR90_beta-prop_4th
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Hira
Beta-prop_WDR3_1st
Beta-prop_Nup120_160
WD40_Prp19
PQQ_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Motif
Other DBs
NCBI-GeneID:
104112204
NCBI-ProteinID:
XP_009620355
LinkDB
All DBs
Position
3:129853378..129861653
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AA seq
626 aa
AA seq
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MGKEKLKSLVTSFTAGGEYLAILSPDGTVRVWNTSSGSLFAQWKPENSGDSFSYMACGFV
GKKRRKEQRLLIALGADDGTVLAVDISAELMRWRKAGALSSGAAGLFFVDKARKIHAVAA
NGLVFEMNSDTGEVIKEFKVSKKPFSSVAHSTDEKIIAAASDKLRFLSLESGKELLKLSP
ASAVAQRLWLSDDAQFAVTAGLGERQLQVWKLDFGERAADYGQVLSMKHPPIIVECRKNC
KGEDGMVVLAISEKGVCYVWNFESVTDEVVKPIKITVKASKGETEKKTGRAKKNIAPIIA
ARLHVLDRDAHLRALIAYGSVESPEFTSVDISSPGEDIVIAAVDQAEKVLAAVQENGHAR
KGADMENEGVKLIQKSKVTNKRPASDLDVTPPVTITDDGNGEPIDGVQIDDLNEPTMGEK
LARLHLADNNEDKSNEDLESPPQTKPPSADSVHVLLKQALHADDRALLIDCLYRQDEKVI
ANSVSLLNPSDVLKLLQSLLSIIQSRGAVLACALPWLQSLLLQHASGIMSQESSLLVLNS
LYQLIDARLSTLHQALQLSSSLELLYAGTIDDGDEEDGAIQPIIYEDESDEEGSEVAMET
ESNPDVEEPEAFSDISDHGLSDGMSE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagctaaaatcgctagttacgtcatttactgcgggcggcgaatatctc
gccatattgtctccagatggaaccgttagagtttggaacacaagtagtggaagcctattt
gctcagtggaaaccggagaattctggagacagtttttcttacatggcttgcggttttgtt
ggaaagaagcgcagaaaagaacaacgtttattaatagcccttggcgcagatgatggaact
gttttagcagttgatatctctgctgaattaatgaggtggagaaaagctggagccctttcc
agtggagctgctggtctgttttttgtggacaaagcccgtaagattcatgctgttgctgcg
aatggtttagtatttgagatgaactctgacactggagaagtcatcaaagagttcaaagtg
tcaaagaagcccttttcctcagtggctcattcaactgacgagaaaattatagctgcagcc
agtgataagttacgatttctaagtttagaaagtgggaaagagttgctgaagttgtctcct
gcctcggctgttgcacagcgtttatggctatctgatgatgcccaatttgctgttactgct
gggcttggcgagaggcaacttcaagtgtggaaacttgattttggtgaaagggctgcagat
tatgggcaggttctttccatgaaacatcctcctataattgttgagtgcaggaaaaattgc
aagggagaagacggtatggttgtccttgcaatatcagagaagggtgtttgttatgtttgg
aactttgagtctgtcactgatgaagttgtaaagccaattaagatcactgtaaaagctagc
aaaggggaaacagaaaagaaaactggaagagcaaaaaagaacattgcgcccataattgct
gccaggttgcatgttttggacagagatgctcatttgagggccttgattgcatatggctct
gtggaatccccagagtttacatcagtagacatttcaagtccaggggaggatatcgtcata
gcagcagtagaccaggccgagaaagtgcttgctgcagttcaagaaaatggtcatgccaga
aaaggtgcagatatggaaaacgaaggtgttaaattaatccagaaaagcaaagtgacgaat
aaacgaccagcatctgatctggatgtcactccaccagtgacaatcacagatgatggtaat
ggtgaacctatagatggagttcagattgatgatctaaacgagccgaccatgggtgagaaa
ctcgcgaggctccatttggcagacaacaatgaagataaaagcaatgaggatctagaatct
cctcctcaaacaaagcctccaagtgctgattcagttcatgttctgctcaagcaagccctt
catgctgatgatcgagcacttttgatagattgcttatacagacaagatgagaaggtcatt
gcaaattcagtatctcttttaaatccatcagatgttctcaagcttttacagtcactcttg
tcaattatccagtcaaggggcgctgtattggcttgtgcccttccctggttgcaaagttta
cttcttcaacacgctagtggaataatgtctcaagaatcctctttgcttgtactcaactct
ttatatcagcttattgatgccagactttcaactctccaccaagctcttcagctatcaagc
tccttagaattgctttatgcagggactattgatgatggtgatgaggaagatggtgccata
cagcctatcatctatgaagatgaaagtgacgaggagggttctgaagttgctatggaaacg
gaaagcaacccagatgttgaggaaccagaggcttttagtgacattagtgatcacggattg
agtgatggcatgagcgagtga
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