Nicotiana tomentosiformis: 104112454
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Entry
104112454 CDS
T05025
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104112454
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104112454
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
UBA_MELK
Motif
Other DBs
NCBI-GeneID:
104112454
NCBI-ProteinID:
XP_070033040
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Position
5:131704743..131721680
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AA seq
584 aa
AA seq
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MGFKKQNRIVLWWFAIVFQFFFFVNGSRVQHSRYWDTVWNGRFDTLFASSFIVIAQDDNK
VEVSFTKTYNPLDAGSAPLNVDKRYIMLRGSSGFYSYGIVEHLKGWPDVMLDELRIAFKL
SKSLFYYMAISDDHRQRVMPPEEDRASGQVLDFKEAVKLTNPSNPKLKDEVDDKYQYSDE
IKNIKVHGWISDTPHMGFWVISPSYEYCNGGPMKQDLTSHVGPTFMAVFFSSPYAAPLLG
VSLTNGEAWRKVFGPVFFYVNSDSGIDHTVFWEDAKRQMNEETTKWSYDFPTSIDYPHAN
ERGSVTGQLVVHARYINEDLFPAKNAYIGLANPGVLGSWQSETKGYQFWTQTDDSGYSKI
SNVRPGIYGVYSKIKYQELSNRQIDLFGPTLWEIGFPDRTAAEFFIPDPLPGFQNYLYIN
TTIHKFRQYGLWNRFADLYPNGDLVYKVGVSDFRKDWFFAHVTRRNLDNTYGPTTWQISF
DLTNVDPNGIYYLRIALASASYGHLQVWIYTPSKPRPWFDTLQIGQSNAIARHGIHGLYM
TFDIQFPGNLLQIGKNIIYLKQASANGPFNGLMYDYIRLEGPPQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaaaaagcaaaacagaatagttttatggtggtttgctattgttttccaattt
ttcttttttgtcaatggttcaagggtgcaacattctagatattgggatactgtatggaac
ggtcgttttgacacgctttttgcgtcaagttttattgtcatagcacaagatgataacaaa
gttgaagtttctttcacaaaaacatataatcctttggatgctgggagtgctcctctaaat
gttgacaaaagatatattatgctgcgtgggagttctggattttattcatatgggatagtt
gaacacttgaaaggatggcctgatgtaatgttggatgaacttagaattgctttcaagctc
agcaagtcactgttctattatatggcaatatcagacgatcataggcaaagggtgatgcca
ccagaagaagatcgggcaagtggccaagtactcgattttaaagaagctgttaaactcaca
aatccatccaaccctaaactcaaagatgaggtggatgacaagtaccaatactcggatgag
attaaaaatattaaagtacatggatggataagtgatactccacatatggggttttgggta
atttcaccaagttatgaatattgcaatggtggtcctatgaagcaagatcttacctctcac
gttggtccaacatttatggccgtatttttcagtagtccttatgcagcaccactattggga
gtttcactaacaaatggagaggcatggagaaaggtttttggtcctgtatttttctatgtt
aactcagattctggcattgatcataccgtattttgggaagatgccaaaagacagatgaat
gaagaaactacaaaatggtcatatgactttcctacatcaatagactatccccatgcaaac
gaacgtggctcagtcactggtcaattagtggtccatgcaaggtacataaacgaagatctt
tttcctgcaaaaaatgcatatattggacttgctaatcctggagttctaggatcttggcaa
agtgagaccaagggttatcaattttggacgcaaactgatgattctggttattccaagata
agtaatgttaggcctggaatttatggcgtttattccaagataaaatatcaagagctgtca
aataggcagattgatttatttggtccaactctatgggaaataggcttcccagatagaact
gctgctgaattctttatacctgatccattgcctggttttcagaattatttgtacattaac
actactatacataagtttagacaatatggtttatggaatcgttttgcggatttgtatcct
aatggagatttagtatacaaagtcggtgttagtgattttcgaaaagattggttctttgcc
catgtaactaggagaaatttggacaatacttatggaccaacaacatggcaaatttcattt
gatctcacaaatgtggatcctaatggcatttactatcttcgtatagctttggcttctgca
tcctatggccatttgcaagtgtggatatacactccgtcaaaaccaaggccatggtttgat
actttacaaattgggcagagtaatgcaatagccagacatggaattcatggcttgtatatg
accttcgatattcaatttccagggaatttacttcaaattggtaaaaatataatatatttg
aagcaagcttcagctaatggtccttttaatggactaatgtatgattatattcgacttgaa
ggacctccacaataa
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